KEGG   Solanum dulcamara (climbing nightshade): 129889417
Entry
129889417         CDS       T09577                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129889417
Enzymes [BR:sdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     129889417
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    129889417
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C HHH_5 ResIII ZW10_C2 DUF2264 LAMTOR
Other DBs
NCBI-GeneID: 129889417
NCBI-ProteinID: XP_055820680
LinkDB
Position
5:66830109..66864315
AA seq 2142 aa
MASDTPRARIDQFFASKKKRKSLSPSLKPARAKKDVKTTQEGSPSTKGSLDGYLVTSQDD
SKSSHIARGTPVKRNLTLEIGPYLKDENKESTLLDKAQSTTSETKTSKEKSDIPSDSHVV
ENKGHGKDVLVTTQVNGNSELKQFATNFLSLYCSELPSSLSLPSAQREGASKRSGSPPIL
DVDNKNAKRIRCISSENNSNINRRSNFECTALNSIEITEGNTSGEARMSLRKCNNVPVIE
STESETPGSTSMKLRVGVTPKSTRGSSIFSPGEAFWNEAIQVADGLFAGSDKFSFQAALE
SDALKNHNEVINSNSLGNGECGNKSHQIFNECIETVSDAGVVSAVGSLRKLGKDLDGEKS
PMPVKHFDFASDEKNLDSVQSHRSNMDIQTISGKRTGSQDHVSLRGYPVLSPRKAAQAKG
NILEVQNKTPKCPVSKSKDVLIQDTDIMASTTPPEKLNIFTANSLSSKDTPSSIAPLKNH
SDLNHWLPSEICNIYRKKGISKLYSWQVDCLLVDGVLHNRNLVYCASTSAGKSFVAEILM
LRRILSSGKIGLLVLPYVSICAEKAEHLEVLLEPVGKHVRSYYGNQGGGSLPKDTAIAVC
TIEKANSLVNRLLEEGRLSELGIIVIDELHMVGDQNRGYLLELLLTKLRYASGEGNTESF
SGETSGTSSGKVDPAGSLQVVGMSATLPNVTAVADWLQAALYQTDFRPVPLEEYVKVGNT
IYNQKMEIVRTISKTADLAGKDPDHIVELCNEVVQEGHSVLIFCSSRKGCESTARHVAKH
LKRFSLNQLSSQNESIDITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETVE
TCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTK
GESVLICKPEEVKRIMTLVNESCPPLHSCLSEDKNGMIHAILEVVAGGIVQTASDINRYV
RCTLLNSTKPFDDVVKSAQDSLRWLCHKKFLGWSEDTKLYTVTPLGRAAFGSSLSPEESL
VVLDDLIRAREGFVLASDLHVVYLVTPINVDLEPDWELYYQRFMELSILDQSVGNRVGVQ
EPFLMRMAHGAPVRASYRSKAGTKGLQGKLDNRSLNDHMLPDEHMLRICRRFYVALILSR
LVQEVPVIEVCGAFKVSRGMVQALQENAGRFASMVSVFCERLGWHDLEGLVSKFQNRVSF
GVRAEIVELTTIPFVKGSRARALYKVGFRTPEAIAEASVPEIVKVLFESSSWADQGSAQR
RIQLGVAKKIKNGARKIVLDKAEEARLAAFSAFRLLGLDVPTLAQPVISTAAGHGAHKEA
STSSAEGSTSSFISLENANQIFSKSLERSKEVDITIPDGAENAKRKKVADKEAFDMEGSN
GLNAEVNESTHQIENVKTSPNPTLKIKSIEGGGTCTDHNRAGKQHSEGAEICNVRVKETS
EKGPMNATAVAGGFDSFLGLWEAAGEFYFDVHFSKKSALNSISPFEIYGIAICWEDSPVY
YVNLPRDLFWSNSRRNIQSLSITSDDTGNVLPPNLQWEIATRRWNRIITIMRKKDIKKFT
WNLKVQIQVLKHPTVSIQRFGGLSVLVKSLGVHLIDNNCYLLSPVPVQDAIDLCIVAWVL
WPDEEKGSNPSIEKEVKKRLSIEAAAAANRNGRWKNQMRQVAHNGCCRRVAQTRALRSVL
WKLVISEGLVEAFGATEMPLVNVLADMELCGIGVDMEGCLQARQILGRKLKILEKEAYKL
AGMTFSLYTAAEIANVLYGHLQLPIPEGRKQGKQHPSTDKHCLDLLRNEHPIVPIIKEHR
TLAKLLNCTLGSICSLARLSMRTQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHMVDFKM
NNKDKDVSPLDVNNYKINARDFFVSTQDNWLLLTADYSQIELRLMAHFSKDSSLIELLRE
PQGDVFTMIAAKWTGKIESIVSQEERDQTKRLVYGILYGMGAKSLAEQIDCTADEAAERI
ESFKRSFPGVASWLQEAVTSCREKGYIETLKGRKRFLSKIKFGNNKEKSKAQRQAVNSIC
QGSAADIIKIAMINIHSVLDHFEKSLSHSAVDEKFHELKGRCRIILQVHDELVLEADPSV
AKEAGLLLQMSMENAVSLLVPLHVKLKIGSTWGSLEPFQARE
NT seq 6429 nt   +upstreamnt  +downstreamnt
atggcttctgatactcctcgagcacgcattgatcaattctttgcttcaaaaaagaagagg
aagtccttatcaccgagtctgaaacctgcaagagccaagaaagatgttaagactacacag
gaagggtctccttccactaaaggttcattggatgggtatttagtgacttctcaggatgat
agtaaatcttcacacatagctagaggcacaccggttaagagaaacctgacgttagagatc
ggtccatatctaaaagatgaaaataaagagagtactttgttggacaaagcacaatctaca
acttctgaaacaaaaacttcaaaggagaagtctgatattccctccgactcacatgttgtt
gaaaataaaggccatggaaaagatgtcttggttactacacaggttaatggaaactcagaa
cttaagcagtttgctacgaacttcttgtcattatattgcagtgaactgccatctagttta
agtttaccttcagcacagcgtgagggtgctagtaaaaggagtggtagccctcccattctt
gatgtggataataagaatgcaaagagaatccgctgcatctcgagtgaaaataattctaac
atcaacagaagatctaattttgagtgcacagctttaaattctattgagataactgagggg
aatacatcaggtgaagctcggatgagcttgagaaaatgtaacaatgtacctgtcattgag
tcaactgaatctgagacacctggttcaacatctatgaagcttcgtgttggtgttactccc
aagtcaactcgtggtagctccattttttcacccggagaagcattttggaatgaagcaatc
caagttgctgatggtttgtttgcgggaagtgataaattttcttttcaagcagcactagag
tccgacgctttgaaaaatcataatgaggtaatcaattccaatagtcttggaaatggagag
tgtggcaataagtcccaccaaatatttaatgaatgtatagagacagtttctgatgccggt
gttgtttctgctgttggttcattgaggaagttgggaaaagatctggatggagagaaatcc
ccaatgcctgttaagcattttgattttgcctctgacgagaaaaatctcgattctgtacaa
tctcacagaagtaacatggatatccagactattagtggcaaaagaactgggtcccaagat
catgtaagtttgaggggatatcctgttctcagccctcgcaaggcagctcaagcaaaaggg
aatatccttgaagttcaaaacaagactccgaaatgtcctgtttccaagagtaaggatgtg
cttatccaggatactgatataatggcatcaacaacacctccagagaagcttaatattttt
acagctaattccttatcaagtaaagacactccttcaagtattgcaccactaaagaatcat
tcagatctcaaccattggctaccttctgaaatatgcaacatttacaggaaaaagggtatt
tcaaaattgtactcatggcaggttgattgtcttctagtggatggagtcttgcacaaccgg
aatcttgtatattgtgcttctaccagtgctggtaaaagttttgttgctgagatattaatg
ttacggagaatcttatcatccggaaaaattggtcttcttgtacttccatatgtgtccatt
tgtgcagagaaggcagaacatcttgaggtccttctggaaccagttgggaagcacgttcgc
agttattatggtaatcagggaggtggtagtctcccaaaggataccgctatagctgtctgc
actatagagaaggcaaattccttagttaaccgactgctagaagagggccgtttgtcagag
cttggtatcatagtgattgatgaactccacatggttggagaccagaataggggttatcta
ttggagttgctgttgaccaagcttcgctatgcgtctggtgaaggaaatacagagtcattc
agtggagaaacttcaggcacaagcagtggaaaagttgaccctgctggcagtctccaagtt
gttggcatgagtgcaactctgcccaatgtgacagcagtcgccgattggcttcaagcagct
ttgtatcagaccgactttcgacctgttccattggaagaatatgtaaaagtaggtaacaca
atttataaccaaaaaatggaaattgtcagaacaatctcgaaaacagctgatcttgctggt
aaagatccagatcacatcgtagagctctgcaatgaggttgtccaagaaggtcactcagtg
ctaattttctgctcaagtcgcaaaggatgtgaatctactgctaggcatgtggcgaaacat
cttaaaagattttccttgaatcaactgagcagccaaaatgagtcaattgatattacttct
gccattgatgccttgcgaagatctccagctgggttggatcctattctggaagagactctt
cccgccggtgttgcctatcaccatgctggactcacggttgaggaaagagaaacagttgaa
acctgttaccgcaaaggacttgtacgtgtcttaacagctacatcaaccttagctgcaggg
gttaaccttcctgctcggagagttatttttcgacaaccacgtattggtcgtgactttatt
gatggtacaaggtaccgacagatggctggtcgtgctggtcggacgggtatagatacaaaa
ggagagagtgtgttgatctgcaaaccagaagaggtcaaacgaataatgacacttgttaac
gagagctgtccaccgttgcactcttgcttatccgaagataagaatgggatgatccacgca
atattggaagttgttgctggtggtattgttcaaacagctagtgacattaaccggtacgtt
aggtgtacccttctcaattcaacaaaaccatttgatgacgtggttaaatcagcacaagat
tctcttcgctggttatgccataaaaaatttcttggatggagtgaagataccaaattatac
acagtcacacctcttggtcgtgcagcttttggcagttctctctctcctgaagaatcactg
gttgtcttggatgatttgattagagcgagggaagggtttgtgcttgcatctgacctgcat
gtcgtttacttagtgacaccaattaatgttgatcttgagcctgattgggaactgtattac
cagaggttcatggagttgtctatcctggatcagtcagttggcaatcgtgttggagttcaa
gaaccctttttgatgcgaatggctcatggtgcaccagttcgtgcatcttataggtcaaag
gctggtactaaagggttgcagggaaagttggataacagatctctgaatgaccatatgctc
ccagacgagcacatgcttcgcatctgtcggagattctatgtggctcttatactatcaagg
ctcgtgcaggaagtgccggttatcgaggtttgtggtgcatttaaggtctcaaggggcatg
gttcaggccttacaagaaaatgctggaaggtttgcttccatggtttctgttttttgtgag
aggcttggttggcatgaccttgaaggcttagtatcaaagttccaaaatcgtgtctcattt
ggtgtgagggcagagattgtagagctcaccaccattccatttgttaagggttcccgagct
cgagcactatataaagtgggttttcgaacacctgaagcaattgctgaagcatcagttcct
gagattgtcaaagtactctttgagtcttcatcatgggctgaccaaggttctgcacaacgg
aggatccaattaggagttgcgaaaaagataaaaaatggtgcacgcaagattgttctcgat
aaagctgaggaagcaaggcttgctgcattctcagcttttaggttgcttggactagatgtt
ccaacgcttgcgcagcctgtcatatctactgctgctggacatggtgctcacaaagaagct
agtacctcatctgcagaagggtcaactagtagctttattagcctggagaatgcgaatcaa
atcttttccaaatccctagaaagaagtaaggaggtcgatatcactattcctgatggagca
gaaaatgcaaaaaggaaaaaagttgctgacaaagaggcatttgatatggaaggatctaat
ggtcttaatgctgaagttaatgaatctactcatcaaattgaaaatgtaaagacttcccct
aatccaactttaaaaattaagagcatcgaaggaggtggtacatgtactgatcataatcgt
gctgggaaacaacactctgaaggagctgagatatgtaatgtaagagtcaaagaaacatca
gagaagggccctatgaatgcgactgctgttgctggtggatttgattctttcctgggtctc
tgggaagctgctggggagttttactttgatgtccatttcagcaaaaagtctgcactgaac
agcatttccccatttgaaatatatggcatagccatttgttgggaagattctcctgtctat
tatgtaaatcttccgagggacttattttggtccaacagcagaaggaatatccaatcgttg
tccattaccagtgatgatactgggaatgttctaccaccaaatcttcagtgggagatagca
acacgtcgatggaatagaattattaccataatgagaaaaaaagatataaaaaagtttaca
tggaacttaaaagttcagattcaggtactcaagcatcctactgtttcaattcagagattc
ggtggtttgagtgttttggtcaaatctctcggagtgcatcttattgacaacaattgctat
ctgttgtctcctgttcccgttcaagatgcaattgacttgtgtatagtagcttgggtcctc
tggcctgatgaggagaaaggttctaaccctagtatagaaaaggaagtgaagaaaagatta
tccatcgaggctgctgctgccgctaatcgaaatggtagatggaagaatcagatgcgacaa
gttgctcataatggttgttgtcgtcgagtagcacaaacacgagccttgcgttctgttcta
tggaaactagtcatttctgaaggacttgttgaggcatttggagcaactgaaatgccattg
gtcaatgttcttgcagacatggagctctgcggaataggtgttgacatggaaggatgccta
caggcacgacaaattctaggaagaaagctgaagattctggaaaaggaagcttacaagttg
gctggcatgactttttcattgtacacagcagcagaaattgcgaatgtactctatgggcat
ctacagcttcctattccagaaggacgtaaacaaggaaaacagcaccctagtaccgataag
cattgcttggatttgctaaggaatgaacatccaatagtaccgataattaaagagcaccgt
accctagcaaaactcttgaattgtacattggggtcaatctgttcacttgccagactatct
atgaggacacagaggtacacactgcatggtcattggctccagacgtcaacagcaacaggg
cgactatcaatggaggaacctaatcttcagtgtgttgaacatatggttgacttcaaaatg
aataataaggataaagacgtttctccgctagatgtcaataattataagatcaacgctcgt
gatttttttgtatccactcaggataattggttactgttaacagcagattattcccagata
gaactgagattaatggcccatttctctaaagattcctctttgatcgaactgcttagggaa
ccccaaggtgatgtcttcaccatgattgctgcaaaatggacaggtaaaatagagtctatt
gtgagtcaagaggagcgagatcaaactaaaaggttggtttacggcattctttatggaatg
ggggctaagagccttgcagaacaaatcgattgtactgcagatgaagctgctgaaagaatc
gaaagctttaaaagatcttttccaggtgttgcttcctggctacaggaagcagttacatct
tgccgtgagaaaggttatatagaaaccctcaagggacgaaagcgtttcttgtcaaaaata
aaatttggaaacaataaggaaaagtctaaagctcagaggcaagctgtgaattccatctgc
caggggtcagctgcagacattatcaagattgcaatgataaacatccactctgtgcttgat
cattttgagaaatctctgtcccattctgcggttgatgaaaagtttcatgagcttaaagga
cgttgtcggatcattttacaggttcatgatgaattagtacttgaggctgatccttctgtt
gcaaaggaagctggattgttgttgcagatgagcatggaaaatgctgtttctcttcttgtc
ccgctgcatgtgaaactgaagattgggagcacatggggatcgttggagcctttccaggcc
agagaatga

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