Solanum dulcamara (climbing nightshade): 129889464
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Entry
129889464 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129889464
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129889464
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129889464
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129889464
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129889464
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
129889464
NCBI-ProteinID:
XP_055820737
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All DBs
Position
5:68141909..68153688
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AA seq
783 aa
AA seq
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MHVAVDLNSYLQFVLTAIAIVVTLLYLVKSTASKYFVVDDDSNFESSASPTAGFGDRRME
PATSEGCAVCGNITKKQCSRCKMVKYCSEACQRSHWNSGHKFKCKDLQLSGKGSSLQGRK
SSAVSLTHASGTSKILDHSKKVLFPYEEFLELFNWDSPGFPPCGLLNCGNSCFANVVLQC
LTYTKPLVAYLLEKGHLRECRRNGWCFLCEFQHHVERASRSQQPFSPIKILSRLPNIGGN
LGYGKQEDAHEFMRFAIDMMQSVCLDEFGGEKAVPPNTQETTLIQHIFGGHLQSQVICTE
CSNVSNQFENMMDLTVEIHGDAESLEECLDQFTAREWLDGDNLYKCDGCNDYVKAWKRLM
VRRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLHPYMSETGDGNDIYKLYAVIVHVDM
LNASFFGHYICYIKDFRGSWYRIDDCKVVNVDLDEVLSQGAYMLLYSRIYPRRTSLFPLG
HLEKEDHDTIKVEDKLGCTDQRVECLSETVSPATVVDSFSPPTLNGSEAKIIGAKEELFS
LITPEDRMEDQEVDSGASSHVRQELQDVKPYTAAIGTSFSRVVSNSSFGASSSAEVEIQE
CETKSPVSDSKDDTEPCLRTTNDCLLNSSLKEDSVATNGEILDDASVSASKFGDISHNKK
LQNSSEMPDIANQNQKKSSHGIHNVVLKSDGGSFSGAKSKPLFSPGFLGKRPLNQSAKKD
VSWQVCHNSTLNGLTNACTKPELSGENHIDMDDQDTNVEIKNSESSNASIGQAAISLNET
NHL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtagcagtggatctgaattcctacttgcaattcgtattgacggccatagccatc
gtagtgacactactctaccttgtcaagagcaccgcttctaagtactttgtcgttgacgac
gactctaattttgagtcttctgcttcgccgacggccggttttggtgatcgcagaatggag
ccggcaacgtcggaaggttgcgccgtatgcggtaatatcaccaaaaaacaatgctctcgt
tgcaagatggttaagtactgctctgaagcttgccagagatctcattggaactcagggcac
aaatttaaatgcaaggatttacagttatctgggaaaggcagttctttgcaagggaggaaa
tcttctgctgtttcactgactcatgctagcggaacctctaagattctagaccattcaaag
aaggtacttttcccatatgaggaattcttggaactctttaactgggatagcccaggtttc
ccaccttgtgggctccttaattgtggaaacagttgctttgctaatgtggttctacaatgt
ctgacatacactaagccacttgttgcctacttgttggagaaaggccatctgagagaatgt
aggcggaatggttggtgcttcctttgtgaatttcagcaccatgtagaacgggctagtcgg
agtcagcagcccttctcaccaatcaaaatactttcacggttgcctaatattggtggtaat
cttgggtatggtaagcaggaggatgcccatgaatttatgaggtttgctattgacatgatg
cagtctgtgtgcctcgatgagtttggtggagagaaggctgttcctcctaacacacaggag
acaacacttattcagcacatatttggcggtcaccttcaatctcaggtcatatgtacagaa
tgcagtaatgtttcaaatcaatttgaaaatatgatggatctgacagtagagattcatggc
gatgctgaatctttggaggagtgcttagatcaattcacagcaagagaatggcttgatgga
gataacttgtataaatgtgatggatgcaatgactatgtcaaagcatggaagcgcctaatg
gtcaggagggcaccaaatatcttaacaattgccttgaaaaggtttcagagtggtaggttt
ggcaaattaaataagagagtgactttccctgaaacattagatctccatccgtacatgagt
gaaacaggagacggcaatgatatttacaagctatatgctgttattgttcatgtggatatg
ttgaatgcgtcatttttcggccattacatatgctatatcaaggattttcgtggaagttgg
tacaggattgatgactgcaaggtggttaatgttgatttggatgaagtgctttctcaagga
gcatacatgctcttatatagcaggatctaccctcggcgaacatccttatttcctcttgga
catttagagaaagaggaccatgatacaattaaagtggaagacaaactgggttgcacagac
caacgtgttgaatgtctcagtgaaacagtatctccggctacagttgttgattctttttca
ccaccaactcttaatggttcagaagctaagataattggggccaaagaggagctattctcc
ttgatcacccccgaggacagaatggaggatcaggaggtagattctggggcaagttctcat
gtccggcaggagttgcaggatgttaaaccatacactgcagctataggaacttctttctct
agagtggtatccaatagttcctttggtgctagttcttcggctgaagttgagattcaagaa
tgtgaaacaaaatcccctgtttctgacagtaaagatgatactgaaccatgtctaagaacc
accaatgactgtcttttgaattcttctttaaaggaggattctgtagccacaaatggtgaa
attctggatgatgcttccgtctctgcatcaaaatttggggacatctcacacaataagaag
ttacaaaattcttctgaaatgccagacatagctaaccagaaccaaaaaaaatcatctcat
ggaatccacaatgtggtcctgaaatcagatggagggagtttctctggagcaaagtcgaag
ccactgttttcccctggctttcttgggaaacgtccattgaaccaatctgccaagaaagat
gtctcatggcaagtttgccataatagcacccttaatggtctgacaaatgcctgtactaag
cctgaattgtctggtgaaaaccacattgatatggatgaccaggatactaatgtggaaata
aaaaattcagagtctagtaatgcatcaattggacaagctgcaatttctcttaatgagact
aaccatttgtaa
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