Solanum dulcamara (climbing nightshade): 129889477
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Entry
129889477 CDS
T09577
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129889477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129889477
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129889477
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129889477
NCBI-ProteinID:
XP_055820756
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Position
5:68423497..68427708
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AA seq
727 aa
AA seq
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MMEFKKAKTVRFSNDGKQNLESSWEKNESNLLEKQLPLYLDGRNVDKVGASKVPKFGKFK
VFPENYVPGKKKILDPGSEIVIQWNRVFLFSCLMALFMDPLFFYLPSVVNKGKSSCMTID
LNLGIIVTCFRTVADVFYLLHVIFKFRTAYVSRSSRVFGRGELVMDKKLIARKYFKSEFF
IDAIAALPLPQIVIWFIIPAIRSSHSDHTNNALVLIVLLQYLPRLYLIFPLSSQIIKAAG
VVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERYATCWKIACEKELSPLQCSSRFLDC
GTVDHADRITWVNNTQVFSNCYPSNSTIFDFGIFANAVTNNVVSSKFLEKYLYCLWWGLQ
NLSSYGQNLTTSTYIWETSFAILIAIFGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDT
EEWMRHRQLPQDLQERVRRFVQYKWLATRGVDEESILLALPSDLRRDIQRHLCLDLVRRV
PFFSQMDDQLLDAICERLSSSLSTQGTYIVREGDPVTEMLFIIRGTLESSTTNGGRTGFF
NSITLRPGDFCGEELLAWALLPRSTLNLPSSTRTVRALSEVEAFALRAEDLKFVANQFRR
LHSKKLQHTFRYYSHHWRTWAACFVQAAWRRFKRRKLAKELYRGESLSYAPEDDQSAYES
ECEHEDDQQTKTTPTNSSNVKQNLGVTILASRFAAHTRRGVQKMKGMDMPTLQKPEEPDF
SAEPDDD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttcaagaaagccaagacggtaaggttttctaatgatgggaaacagaatctt
gaaagttcatgggagaagaatgagagcaatcttcttgaaaagcaactacctttgtatctt
gatggtagaaatgttgacaaggttggagctagtaaggttcctaaatttgggaagtttaag
gttttcccagaaaattatgtacctggaaaaaagaagattcttgatccagggagtgaaatt
gttatacaatggaatagggttttcttgttttcttgtttgatggctctcttcatggatcca
ttattcttttaccttccatcagtggtgaataaggggaagtcttcatgtatgacaattgac
ttgaatcttgggattattgttacatgttttcggacagtagcagatgttttctatttgtta
catgtgatatttaagtttaggactgcttatgtttcaagaagttcaagggtgtttggaagg
ggtgaacttgttatggataagaaattgattgcaaggaaatacttcaagtctgaattcttc
attgatgctattgctgctttgcctcttcctcagattgtaatatggttcatcataccggct
attagaagttctcattccgaccacaccaacaacgctcttgtactaatagtcctgctgcaa
tatctgccaagactctatctgattttcccattgagttctcaaattattaaagctgctggg
gttgtcacaaaaacagcttgggcaggggctgcttacaacctgctactctacatgttggca
agccatgtccttggtgcttcctggtatttattgtcaatcgaaaggtatgctacatgctgg
aaaatagcttgcgaaaaggagcttagtcccttacaatgctccagtcgttttctcgactgt
ggtactgtagaccatgcagacaggataacatgggtaaacaacacccaagttttcagcaac
tgctatccttctaattcgaccattttcgactttggaatatttgcaaatgcagttacaaac
aatgttgtctcctctaagttccttgagaagtacttgtactgcttgtggtggggtttacaa
aatttaagttcttatggccaaaacttgaccacaagcacatatatatgggaaacttcattt
gccattcttattgctatttttgggctagttctgtttgcccatttgattggaaacatgcag
acatacttacaatctatcactgtgaggcttgaagaatggaggctcaagcgacgagacact
gaagaatggatgaggcatcgccaactccctcaggatctacaagaacgtgttagacgtttt
gtacagtacaagtggcttgccactcgaggagtagatgaagaatctatcctgcttgcttta
ccttcagaccttcgacgtgacatccaacggcacctatgtttagaccttgttcggcgtgtt
cccttcttctcgcaaatggatgatcaactgcttgatgccatatgtgaacgtctgagttct
tcgttaagtactcaaggaacgtacattgtacgtgagggtgatccagtaactgaaatgctc
tttattattagaggaacattagagagctcaactacaaatgggggtcggacaggcttcttc
aactcaattactttgaggccaggtgacttttgtggcgaagaacttcttgcctgggcgtta
ttgcccagatccactcttaacttgccttcgtcaacgagaacagtgagagccctgtcagaa
gtagaagcttttgcattacgagcagaggatctcaagtttgtagccaatcaattcagacgt
cttcatagtaagaagctacagcacactttccgttattactctcaccactggagaacttgg
gctgcctgtttcgttcaagctgcttggcgtcgtttcaagaggagaaagctggccaaagaa
ctttatagaggtgagtccttgtcttatgctcccgaggacgaccaatcagcatatgaaagt
gaatgtgaacacgaggatgatcaacaaacgaagactacaccaacaaactcttcaaatgtg
aagcaaaaccttggagttacaatattggcatcaagatttgctgcacacacaaggagagga
gttcagaagatgaagggtatggacatgcctacgttacagaagcccgaagagcctgacttt
tcggctgagccagatgatgactag
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