Solanum dulcamara (climbing nightshade): 129889493
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Entry
129889493 CDS
T09577
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdul01001
]
129889493
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129889493
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129889493
Protein kinases [BR:
sdul01001
]
Serine/threonine kinases: Other
Other
129889493
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129889493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
LisH
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
129889493
NCBI-ProteinID:
XP_055820781
LinkDB
All DBs
Position
5:complement(68745755..68759122)
Genome browser
AA seq
1963 aa
AA seq
DB search
MEEEPQQQSLETEGEEERRTETTPTEEHEEEGGGGEEDEEEAENEELIMKAQALMEKITA
SPDNPNPNTIHAFSSLFETQEASYMEESGHSAPNNGRSSHNVGRLGNLIRDTDEFFELIS
SKFLSERRYSVSVKAAAARLLFSCSLTWMYPHVFEDPVLENLKIWTMDDTTRLSGDDHYW
KHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKLMHYLRIRILGDTTT
SQRDATSLLDGKSSSTGTGVRAREECRSRFRQVAESSHLDVPRVAEDGLHGDQVLDKDRD
RSDSRHMHGDERWTDEEPPDSMAVDDDNYQADADGEERWHIRDLRDGKAKPGNRSLREDE
HDESTRDDLSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLSGQSRSRNLTRNQ
ESRRAPDNKKNLSRTNVDGFAMERDENDECFQECKVGSKDITDLVKKAVAAAETEAKAAN
APAEAVKAAGDAAAEVVKSAAFEEFKKSNDEEAAVLAASKAVSTVIDAAIAVEVSRSAIS
EGESQDIKATAQEANEDVDEFFILDSDSLAKLREKFCIQCLIILGEYVEVLGPVLHEKGV
DVCIGLLQRNSKHKEGCKLSLLLPDVLKLICALAAHRKFAAVFVDRGGMQKLLAAPRAPQ
TFCGLSSCLFAIGSIQGIMERVCTLPSSIIHQVVELALQFLECPQDQARKNAALFFAAAF
VFRAVVDAFDAQDGLQKMLNLLQDAALVRSGVSSGALTASGSLRSDRSPPEVLTASEKQI
AYHTCVALRQYFRAHLLLLVDSIRPNKSVRSAGRNIPSVRAASKPLDISNEAMDAVFRLI
QKDRRLGPAAVRARWPVVDKFLNCNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLV
PYSRKLIVNATLSNDRVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSISNKPSV
STQAQQTNAVQSANTPGVETRDRNADRSETRDRNAERFLPDRAVNISSQNENRESTLSDR
GSTVVAGTSAVSGTSHGPVSTVTSGLVGERRISLGAGAGCAGLAAQLEQCYRQAREAVRA
NNGIKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIR
DSGNQTPGSEQNRWQAELAQVAIELIGVVTNSGRASSLAASDAATPTLRRIERAAIAAAT
PITYHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQETLSVQ
IQWPSGRAPRGFLSVKPKLPSLDEDGGLKSESIVCSSRRRPLAFSSTRGLSSKSLPVEVS
PSTSGCKFSNSKKCATPVATSETPSLSTVKSGGDPDIMFKTPIVLPMKRKLTDLKEGGSV
PSVKRLNTGEHSVRSPVCVTPNSVRRGGLPSDPNVPSTPNSTLREIHNRPGSSAFPTEGD
DTSMVSSSQHGLLSDSQPSNAERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCP
EPKRSLDAPSNVTSRLSTRDFRSLNGGTHGKRKDRQFVYSRFRPWRTCRDDAGVLLTCVS
FMGDSSQIAAGTHSGELKIFDSNSSTVLESFTSHQAPLTLLQSYLSVETQLLLSSSAHDV
RLWDATSVSAGPKHSFEGCKAARFSNFGTTFAALSAEPSRREILLYDTQTCQVELKLTDT
SSIPSGRGHMYSLVHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPAGNEVI
INSEVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVKHPLFA
AFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIGRRRPT
EDDSDPDDAESEDDDEDDDDIDEEAILGTDLDGDGESDADDLSNDDDSVSELDDEEDEDG
DFIVDGVDFGGGGGILEIVTDGEDEDDSELVESFSSGDDDDLL
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagccgcaacaacaatcattggagacggaaggggaggaggagcggcggacg
gagacgacaccaacggaggagcatgaggaagaaggaggaggaggagaggaagatgaagaa
gaggcggaaaatgaggagttgatcatgaaagcacaagcgttaatggagaagatcactgct
tcgcctgataaccctaaccccaatactatccatgcgttttcttctctttttgaaacccaa
gaagctagctacatggaagagagtggtcattctgcccctaataatggccgatcttcccat
aatgttggacggctagggaaccttatccgggacactgatgaattctttgaactgatatct
tcaaagttcctatctgagaggagatattcagtttctgtgaaggctgctgctgcaaggctg
ctttttagctgttcactaacatggatgtatccacatgtttttgaagaccctgtgctggaa
aatttaaaaatctggacaatggatgacacaaccagattgtctggtgatgatcattattgg
aagcatgagtcaggtgatcggaggtcctctgattctgagatgctgaagacctactctact
ggacttcttgctgtatgtttggcaagtggtggtcaagtggtcgaagatgtattaacatct
gggctcccagcaaaacttatgcactatcttcggattagaattttgggggataccaccaca
agccaaagagatgcaacatctttgttggatggcaaatcatcatctacaggtactggtgta
agagctagagaggaatgtagaagtagattccggcaagttgccgaaagttctcatttggat
gtccccagagtagcggaagatggacttcatggtgatcaagttctcgataaggatcgcgat
agaagtgacagtaggcatatgcatggggatgaacgttggactgatgaagagccacctgat
tctatggctgtggatgatgataattatcaggcagatgcagatggtgaagaaagatggcat
attagagatttacgtgatggaaaggcaaagcctggtaacagatccctaagggaagacgaa
catgatgagagtactagggatgatttgtcaagacgcagggtaaatcgtgggtggacaaga
cacagaggacggggaagggtgactgagggtgttccggataatgaagcagctttgacctct
ccagggtctgcaagtagattgagtgggcaatctcgcagcagaaatttaacccggaatcaa
gaatcgagaagagcacctgataacaagaagaatttgagtaggacaaatgttgatggtttt
gcgatggagagggatgaaaatgatgaatgtttccaagaatgtaaagtcggctccaaggat
atcacagatctagtgaagaaagctgttgcagctgctgaaacagaagcaaaagcagctaat
gctccagcggaagctgttaaagcagctggtgatgctgctgcagaagtagtcaagagtgct
gcttttgaggagtttaagaagtcaaatgatgaggaggctgcagttttggctgcttcaaaa
gctgtatccacagtcattgatgctgctattgctgttgaagtttcaaggagtgctatttct
gaaggtgaatcacaagacataaaagcaacagctcaagaagcaaatgaggatgttgatgag
ttcttcattcttgatagtgactctcttgcaaagttgcgagagaagttctgcatccagtgt
cttattattttgggagagtatgttgaagttcttggtcctgtgttgcacgaaaaaggagta
gacgtgtgtattgggctactgcaacgtaattccaagcataaagaggggtgcaaactctcg
cttcttttgcccgatgttctgaagctgatctgtgctttggctgcacatcggaaatttgct
gcagtatttgtggatcgtggcggcatgcaaaaattgcttgctgccccaagagctcctcag
actttttgtggcctttcttcatgcttatttgctatagggtcaattcagggaataatggaa
cgcgtttgtactcttccttcaagcattatccatcaggtggttgagttggcgcttcagttt
cttgaatgtcctcaagatcaagccaggaaaaatgcggccttattttttgcggctgcattt
gttttcagagctgtcgtagacgcttttgatgctcaggatggtttacagaaaatgcttaat
ctcttgcaagatgctgcattagtgagatctggagtttcttctggggcattaactgcttca
gggtcattacggagtgacagatcaccaccagaggtgctgaccgcttctgagaagcagata
gcatatcacacatgtgtcgcacttcgacagtacttcagagcacatcttcttttgctggtg
gattcaattcgtcctaataaaagtgttcgcagtgctggccgaaatatcccaagtgttagg
gctgcatctaagcctcttgacattagtaatgaggctatggatgcagttttccgtttaatc
cagaaagatcggagacttggtcctgcagctgtcagagcccgctggcctgtagttgacaag
ttcttaaattgcaatgggcatattacaatgttggaattatgtcaggctccacctgttgag
cgttatttgcatgacttgcttcagtatgctcttggtgtacttcatatcgtcactttagta
ccttacagccgtaaacttattgtaaatgcaacattaagcaatgatcgtgtgggtatagct
gttatattggatgcagctaacagtgccggttatgtagaacctgagattgttgaagcagca
ttgaatgtgttagtttgtctcgtgtgtcctccaccttcaatcagcaataaaccatctgta
tctacacaagcacagcaaaccaatgctgtccaatctgcaaatactcctggtgtggagacc
agagaccggaatgcagatcggagcgagaccagggacagaaatgcagagcggtttcttcct
gatcgagctgttaatatctccagtcagaatgaaaatagagaatctactttatcagaccgt
ggaagcacagtcgttgctggcacatctgcagtcagtggcacttctcatgggcctgtgtct
acagtgacatcaggattagttggagaacgaagaatatcactaggtgcaggagctggttgt
gctggcctcgctgctcaacttgaacaatgttaccgtcaagcgagagaagctgttcgggca
aacaatggtattaaggtcctcctgcagctcctccagccacggatagttactcctccagct
gcaattgactgtcttcgtgctcttgcttgccgagtacttcttggtttggcaagagatgat
acaattgcacatatattaacaaaacttcaggttgggaagaagttgtcagaactcatacga
gattcaggaaatcagactcctggcagtgagcagaaccggtggcaagcagaacttgcacag
gtggctattgaacttattggggttgtaactaattctggccgtgcaagttctctggctgct
tccgatgctgcgaccccaacattaaggcgtatagagagagctgctatagctgctgctact
ccgatcacatatcatgcaagggaacttttactcctcatccatgaacacctacaagcttct
ggtctgacagatactgcaactatgcttcttaaggaggctcagttgacacctttgccatct
ttagctgctccgtcatctctggctcatcaaacatcagggcaggagacattgtcagttcaa
attcaatggccatctggtcgtgcacctaggggatttttgtcagttaaaccgaaacttccg
tcattggatgaggatggtggattgaaatctgagtcgattgtctgttcttcaaggaggcgg
ccattggccttttcatctacgcgtggtctgtcctcaaaatctctccctgttgaagtctct
ccatcaacatcaggctgcaagttcagtaattcgaaaaagtgtgccacacctgtagctaca
tcagaaactccatcactatctacagttaaatctggtggagatcctgacatcatgtttaaa
actcccattgtattgccaatgaaacgcaagttaactgatctgaaggaaggtggatcagta
ccatcagttaagcgactcaataccggtgaacattcagtcaggtctccggtttgtgtcact
ccaaattcggtccgtagaggcggtctaccatcagatcctaatgtgccttcaacgccaaat
tctactttgagagagatccataatcgacctggctcaagtgcttttccaactgaaggtgat
gatacttcaatggtgtcgtcttctcaacatggtcttctaagtgactcacaaccctcgaat
gcagagcggttaaccttggactcactggttgttcagtacttgaagcaccagcatcgccaa
tgtcctgctcccattacaacgttacctcctctttcgctcttgcaccctcatgtctgtcct
gaaccaaaacgaagccttgatgcaccatcaaatgtgacatcacggcttagtactcgtgat
tttagaagtttgaatggtgggacacacggaaagcgtaaggatcgacaatttgtctacagt
agatttagaccatggcgaacttgccgggatgatgctggtgtcttattgacatgtgtctct
tttatgggagattcttcgcaaattgctgctggcacccattctggagagctgaaaatattt
gactctaacagcagcactgtcttagaaagcttcaccagtcaccaggcacctttaacactt
ctacagtcatacctttctgttgagacacagctgctcctgtcttcaagtgctcacgatgtg
aggttatgggatgcaacttctgtatcagctgggcctaagcattcatttgaaggctgtaaa
gctgctcgatttagcaactttggtacaacgtttgctgcattgtctgcggaaccatcccgg
cgcgagattcttctatatgacactcaaacctgccaagtggaactgaaacttacagacacg
tccagtattccttcaggccgaggacatatgtattcccttgtacattttagcccatcagac
aatatgcttctctggaacggggtcttatgggatactcgtggttctggcccaattcatcgt
tttgatcaatttaccgactatggtggcgggggctttcatcctgctggcaatgaggtcatc
ataaattctgaggtatgggatttgcggaacttcaggcttctgcgaagtgtaccgtctttg
gaccagactgtaataacatttaatgcgagtggtgatgtgatatatgccatcttgagaaga
aatcttgaggatgtcatgtcagcattccagacacgtcgtgttaaacatcctctctttgct
gctttccgtacggtggatgctgtcaactactctgacattgcaaccattccagtagaccgt
tgtgtacttgactttgcgacggagccaactgattcatttgttgggctggtcacaatggat
gaccaagatgagatgtattcttctgctagggtgtatgaaattggtcggaggaggccaact
gaggatgattcagaccctgatgatgctgaaagtgaagatgacgatgaagatgatgatgac
atcgatgaggaagcgatccttggaacggatcttgatggggatggtgaaagtgacgctgat
gatttgagcaatgatgatgatagtgttagtgagcttgatgacgaagaggatgaagacgga
gacttcattgtagatggtgtggactttggtggtggaggtggtatattggagatcgtgaca
gatggtgaagatgaggatgacagtgagcttgttgaatcatttagtagtggggatgatgat
gatctcttgtag
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integrated database retrieval system
