Solanum dulcamara (climbing nightshade): 129889503
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Entry
129889503 CDS
T09577
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129889503
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129889503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_2
HEAT_EZ
TPR_Trm732_C
HEAT_GCN1_C
HEAT_GCN1
HEAT_MROH2B_C
TPR_TNPO3_IPO13_3rd
HEAT_GCN1_C_2
UTP20
Motif
Other DBs
NCBI-GeneID:
129889503
NCBI-ProteinID:
XP_055820790
LinkDB
All DBs
Position
5:complement(69022483..69057399)
Genome browser
AA seq
2050 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRLTAARQIGEIAKSHPQDLNSLLSKVTQYLRSKKWD
TRVAAAHAIGSIAENVKHTTLAEHCSSVEVKMSEEGISGNVEELVAWPKCYPEIGGTSFR
SFDLNKVLEFGALLASAGQEYDIPTDNSKNSRERLARQKQNLRRRLGLDVCEQFMDVNEM
IRDEDLIMQRANSPGNGVAAQYYSSRPVGNIRHYVAKMVPSVRSRRPSARELNLLKRKAK
ISSKDQTKGWNKDGDAEAPQSQDIISPRGMCPDMSSSNKLLGENISDEDGLEYDGDKIWP
FQSFVEQLILDMFDPLWEVRHGSVMAMREILTHQGANAGVIIPDLRCDSALNIKIEERVD
ENTVKRERPIDLNMQVPLDELESVSKKLKVQPEDASYLPMDTMVCTSRDGDPGGVTVKVE
DVGLSLAVEQANGEFSIGSVKLETQSHLSGGSLGNDMSDEKGGGMDKTSMEKMGILENLP
ENCELMNLVKLARHSWLKNCEFLQDCAIRFLCVLSLERFGDYVSDQVVAPVRETCAQALG
AVLKYMHPTLVHETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLSELLFCVLPACK
AGLEDPDDDVRAVAADALLPTAASVVALNGQLLHSIIMLLWDILLDLDDLSPSTSSVMNL
LAEIYSQEQMIPKSFGEKKKFDLNEIDRQDDLGEGTWSSENPYMLSTLAPRLWPFMRHSI
TSVRYSAIRTLERLLEAEYKRSIVESSSSFWPSFILGDTLRIVFQNLLLESNEEIVQCSG
RVWRILLQCPVEDLEDASKVYFPSWLELATTPYGSSLDTAKMFWPVALPRKSHFKAAAKM
RAVKPENDSLKSICSDSGEGITVLEKSVEASTSSGKIVVGADIDMSVTYTRVVTATVLGI
LASRLREGSLQFFIDPLWKALTSLSGVQRQVASMVLISWFKELKTRNILDMDAVIAGISS
NFRSWLLDLLACTNPAFPTKDSFLPYIELSRTYDKMRNEARQLYHATESSDMLKDLLSST
PVDLDNLSADDAISFASKLQFSSIDTTGEESAARNSLDELETFKQRLLSTSGYLKCVQNN
LHVTVSSLLASAVVWMNELPVKLNPIILPLMASIKREQEEILQSKAAEALAELIYRCMGR
KPGPNDKLIKNLCSLTCMDPCETPQAGILSSIEIIEEQDLLSSGSSSNRHKSKVHMLSPG
EDRSKVEGFISRRGSELALKFLCEKLGGSLFEKLPKLWDCLVEVLKPCSLEGMTAEDERL
ITQAIELVKDPQNLINNIQVVRSIAPMLDETLRPKLLTLLPCIFRCVRHSHIAVRLAASR
CITTMAKSMTLDVMGSVIENVVPMLGDITSVHSKQGAGMLVSLLVQGLGIELVPYAPLLV
VPLLRCMSDSDHSVRQSVTHSFATLVPLLPLARGVSPPVGLSEHLSRSQEDVKFLEQLID
NSHIDDYKLSTELKVTLRRYQQEGINWLAFLKRFNLHGILCDDMGLGKTLQASAIVASDL
AEHIALNSSQDLPPSLIICPSTLVGHWVYEIEKFIDGSLLTTLQYVGSAQERSSLRSQFN
QHNVIVTSYDVIRKDVDYLRQLFWNYCILDEGHIIKNSKSKITVAVKQLKAQHRLILSGT
PIQNNVLDLWSLFDFLMPGFLGTERQFHASYGKPLLAARDPKCSAKDAEAGVLAMEALHK
QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHVRQEISSMVKHNESD
ASQKNDLPKASSHVFQALQYLLKLCSHPLLVFGERVSESLSSVVSELFSPGSDIVSELHQ
LHHSPKLVALQEILSECGIGVDSGSEGSICVGQHRVLIFAQHKALLDIIERDLFQNHMKN
VTYLRLDGSVEPEKRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPM
RDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLKTMNT
DQLLDLFTSAESKKGASRSKRSDEKSDVDSILPRSGKGLKAILGGLEELWDQSQYTEEYN
LGQFLAKLNG
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaatcgtcacggcttaatcgcctgcttactttattagacactggctcc
actcaagcaacaagattgacagcagctaggcagattggtgaaatagccaaatcacatcct
caggacctgaactcgttgttgagtaaggttacacaatatcttaggagtaaaaaatgggac
accagagttgctgctgctcatgccattggatcaattgctgagaatgttaaacatacgact
ctggctgaacactgttcatctgtagaggtgaaaatgtctgaagaaggaatctcaggcaat
gttgaagaattggtagcttggcctaaatgttatcctgaaataggagggacctctttcaga
agttttgacttgaacaaagtacttgagtttggggctctattggcatcggcaggacaggag
tatgatattcctacggacaatagcaagaattcaagggagcggttggcccgccagaaacaa
aacctgcgacgtcgattgggattagatgtgtgtgaacagttcatggatgtcaatgaaatg
ataagggatgaggacctgatcatgcagagagctaattctccaggaaatggtgttgctgct
cagtattattcatcgaggcctgttggcaatatccggcattatgttgcaaaaatggtacca
agtgtcagatctcggaggccaagtgcacgggaactaaatcttttgaagcggaaagcaaaa
ataagctcaaaggaccaaacaaaaggatggaataaggatggagatgcagaagctccacaa
tcacaagatataatatctcctaggggcatgtgtcctgatatgtcgagctctaataagcta
cttggtgaaaacatctctgatgaagatggtctagagtatgatggagataagatttggcca
tttcagagttttgttgagcaactcatccttgatatgtttgatcctttatgggaggttcgt
catggcagtgtcatggctatgagagagatcttaactcatcaaggtgctaatgcaggagta
atcattccagacttgagatgtgatagtgcattaaatattaaaatagaagagagggtagac
gagaatactgtcaaaagggagagacccattgatctgaatatgcaagttccacttgatgag
ctagagtcagtttccaagaaactgaaggttcaacctgaagatgcatcttatttgccgatg
gataccatggtctgtacaagcagggatggtgatcctggtggtgttactgtaaaagtggaa
gatgttggattgagtttggctgttgaacaggcaaatggtgaatttagcattggttctgtt
aagttggagactcaatctcatctcagtggtggaagtctgggtaatgatatgtcagatgag
aaggggggtggcatggataagacttcgatggaaaagatgggtattctagaaaaccttcct
gagaattgtgagctgatgaacttggttaaattggctaggcattcttggctcaagaattgt
gaatttcttcaggattgtgctattcgtttcttatgtgtcttatcattggaacgttttgga
gactatgtatcggatcaagttgtggctcctgttcgtgagacttgtgcacaagctttgggt
gctgtgcttaagtacatgcatcctactctagttcatgagacactgaatatcttgctacag
atgcagcgtagaccggaatgggagattcgtcatgggagtcttttggggatcaagtaccta
gttgccgtgcggcaggaaatgctttctgagttgcttttctgtgttctcccggcatgtaaa
gctggtcttgaagatcctgatgatgatgtgagagctgttgcagcagatgctttattgccc
actgcagcgtctgttgttgcattaaatggtcagctgttgcattctataatcatgttgctt
tgggatattttgcttgacttggatgatctcagtccatctaccagcagtgtgatgaatctg
ttggcagagatctactctcaagagcaaatgattcccaaatcttttggggagaaaaagaaa
tttgatctcaatgaaattgatcgccaagatgaccttggggaagggacatggtcttcagaa
aatccttacatgctatcaacattggcgccaagactatggcctttcatgagacatagtatc
acttcagtccgttattcagcgatccgaactttggagcgattgcttgaagccgaatataag
aggagcattgttgagtcatctagctctttctggccttcatttattttgggtgatactctc
aggattgttttccagaatttgctgcttgaatcaaatgaggagatcgtccagtgctcaggc
agggtttggaggatccttctccagtgcccagtggaagacttggaagatgcttcaaaggta
tattttccttcctggttggagttagcaactactccatatggttcatcattggatactgca
aaaatgttttggcctgtagctcttcctcgcaaaagccacttcaaagcagctgcaaagatg
cgagctgtgaaaccagaaaatgattcccttaaaagcatatgctcagattcaggtgaaggc
attactgtgctggagaaaagtgtagaggcttccaccagcagcggaaagattgtggtgggt
gctgacatcgacatgtcggtcacgtatacacgcgttgttactgccacagtcttgggcatt
ttagcttctaggttgcgtgaaggttctttgcaattttttattgaccccttatggaaggcg
cttacctctctatctggagttcagcggcaggtagcttcaatggtacttatttcttggttt
aaagaactgaaaaccaggaacattttggatatggatgcggtcattgctggcatctcaagt
aattttaggagctggttgttggatttgttagcctgcactaatcctgcgtttcctacaaaa
gattcttttcttccttacattgaactctcaagaacatatgataaaatgcgcaatgaagcc
cgtcaactgtaccatgcaaccgagtcatctgacatgctgaaagatttgttatcatctacc
ccggttgacttggataatctcagtgcagatgatgcaattagttttgcatctaaacttcaa
ttttcaagtattgatactacgggggaggaatctgccgcgcggaacagtctggacgaatta
gaaacattcaaacagaggcttttgagcacttctgggtatttgaaatgcgtccagaacaat
ttgcatgttactgtctcttctttactggcttctgctgttgtctggatgaatgaacttccc
gtgaaattgaatccaattatattacctttgatggcttctattaagagagaacaggaggag
atattacaaagtaaggcggctgaggctcttgcagagcttatctatcgttgtatgggacgg
aagcctggaccaaatgacaagttaattaagaacctctgtagtttgacatgcatggatcct
tgtgagacacctcaagccggaattttgagttctatagaaataattgaagagcaggatctt
ctatcctcaggaagtagcagtaatagacacaaatcaaaagttcatatgctctcgcctggt
gaagatcgttctaaggttgagggcttcatcagtagacgtggatctgaacttgccttgaag
ttcttatgtgaaaaattgggtggatctttgtttgaaaagcttcctaagctgtgggactgc
ctagtggaagttcttaagccttgtagccttgaaggcatgactgcagaagatgaaagactt
attactcaagctattgagttggttaaggatcctcagaacttgattaacaatatccaggtg
gtccgttccattgcaccaatgctggatgagacattaagaccgaaactcctcactctcctt
ccatgcattttcagatgtgttcgtcattcacatattgctgtgagattagctgcatctaga
tgtattacaaccatggccaagtcaatgacattggatgtgatgggttcagttattgagaat
gtggtgcctatgttaggtgacattacatctgtacattctaaacaaggagctggcatgctt
gtcagtttgcttgtccagggacttggtattgagctggttccatatgctcccctcttagta
gttccccttctgaggtgtatgagtgattcagatcattctgtcagacagagtgtgacacat
agttttgcgacccttgtgcctctacttccattagcacgtggtgtttctcctcctgttggt
cttagtgaacacttatcaagaagtcaagaagatgttaaatttttggagcagctaattgac
aactctcatattgatgattacaagctctcaactgaactaaaggtgacattgagaaggtac
caacaagaaggtataaattggttggcatttttgaagcgctttaatcttcacggcatttta
tgtgatgacatgggccttggtaagacccttcaagcatcagcaattgtggcatctgattta
gcagagcacattgctctaaatagttcccaagatctacctccatccttgataatatgcccc
tcaacccttgttggccactgggtttatgaaatagagaagtttattgatggttctttgctt
accaccctccagtatgttggttctgcacaagagcgcagttctctacggtctcagtttaat
cagcataatgttatagtgacatcatatgatgttatccgcaaagatgttgattatcttaga
caactgttttggaactattgcattctagatgagggacatataataaagaattctaagtcg
aaaataacagttgctgttaaacaattgaaggcacaacaccgcctcattcttagtggaaca
ccaatacagaataatgtgttggatctgtggtcactctttgactttcttatgcctgggttt
cttggaactgaaagacaatttcatgcctcctacggtaaaccactactggctgccagggat
cccaaatgttcagccaaggatgctgaagcaggtgtgcttgctatggaagcattgcacaag
caggtgatgccttttctccttcgccggactaaagatgaagtcttatctgatctgccagag
aaaattattcaggatagatactgtgacctgagtcccgttcagctaaaactctatgaacaa
ttctctggttcacatgtaagacaagaaatttccagcatggtgaagcacaacgaatcagat
gcaagccaaaaaaatgatttgccaaaagcatcttctcatgtattccaggcacttcaatac
ttgcttaaactttgtagtcatcctctgcttgtgtttggggagagagtttcagaatccctc
tcatctgttgtgtcagagctcttctctcctggttctgacattgtttcagaactccatcaa
ctccaccactctcccaaactagtcgccttgcaggagatcctttcggagtgtggaattggt
gttgattcaggttctgaaggctctatttgtgtgggacagcacagagtcctgatatttgca
caacataaggccttgttggacatcattgagagagacctgtttcaaaatcatatgaagaat
gttacatacttgaggctggatggatcagttgaaccagaaaagcgctttgacattgtgaaa
gccttcaattcggatcctactatagacgttttattgcttactacacatgttggtgggctt
ggtttgaacctgacatcagctgatacccttgtgttcatggagcatgactggaatccaatg
cgagatcaccaggctatggatcgagctcacaggttgggccagcgaaaagttgtaaatgtt
catcgtctcattatgcgaggaaccttggaagaaaaagtaatgagtctccaaaggttcaaa
gtgtcggttgccaatgcagtgatcaatgcagagaatgcaagtttgaaaacgatgaataca
gaccagttacttgatctatttacttcggccgaaagtaaaaagggagccagtagatccaaa
agaagcgatgaaaaatctgatgtggactcaatcttgccacgtagtgggaagggcttgaaa
gccattctcggaggattggaggagctttgggatcagtcacaatacacagaggagtacaac
ctgggccagttcttagcaaagcttaatggttaa
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