Solanum dulcamara (climbing nightshade): 129889508
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Entry
129889508 CDS
T09577
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
129889508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129889508
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
129889508
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
Motif
Other DBs
NCBI-GeneID:
129889508
NCBI-ProteinID:
XP_055820798
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Position
5:complement(69132168..69140048)
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AA seq
352 aa
AA seq
DB search
MEKPAKPKGRLCTLCNEKRAALKRPKTLEQICRECFYIVFEDEIHRVIVDNQLFKPGERI
AIGASGGKDSTVLAYVISELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLP
LKVVSYSELYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIA
ETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECI
YSPNAYRGFAREFIKDLERMRPRAILDIIKSGEDFRISTSTKMPEQGICERCGYISSQKW
CKACVLLEGLNRGLPKLGIGRSRGINSERNTNVKQTNGTQSLQSKQCGTLDF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccggcgaagccaaaaggccgactgtgtactctctgtaatgaaaaacgcgcc
gccttgaaacgccctaaaacccttgaacaaatatgcagggagtgcttttatatagtgttt
gaagatgagattcatagggttattgtggataatcagcttttcaagcctggggaacgcata
gctattggagcttcgggtggaaaagattcaacagtgcttgcatatgtaatttcagagttg
aaccgtagacacaactatggattggatctcttcttactatcagtggatgaaggcataact
ggttacagggatgactctcttgagacagtcaaaagaaatgaaatacagtatggacttcct
ttaaaagtagtttcctacagtgagttgtatgggtggacaatggatgaaatagtgaaattg
ataggcttgaagaacaactgcacattttgtggtgtttttcgtcggcaggcccttgatcga
ggtgctgcattgctaaaggtagacaagcttgttaccggacataatgcagatgatatcgct
gaaacagtccttttaaatattttgcgaggtgatattgcaaggttgagtagatgcacatcg
ataattaccggagaagatgggccaataccgagatgcaagcccttcaaatacacatatgag
aaggaaattgtcatgtatgcatattttaaaaagctggactacttctctacagaatgtata
tattcccctaatgcttaccgtggttttgctcgtgagttcattaaagatttagaaaggatg
agaccaagagccattctcgacattatcaaatcaggtgaagactttcggatctccacctct
acaaaaatgccagaacagggaatttgtgaaagatgtggttatatatccagccagaaatgg
tgcaaagcatgtgtcttgctggagggcctcaatcgcggtttaccaaaattaggcatcggg
agaagtcgggggatcaatagcgaacgtaatacaaatgtgaaacaaactaatgggacacaa
agtttacaaagcaagcagtgtggaactttggacttctga
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