Solanum dulcamara (climbing nightshade): 129889552
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Entry
129889552 CDS
T09577
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129889552
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
129889552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
Fer4
AAA_15
AAA
AAA_22
Fer4_6
Rad17
RsgA_GTPase
AAA_23
AAA_16
AAA_29
nSTAND3
NACHT
Fer4_2
DUF5906
Fer4_9
NPHP3_N
TsaE
Fer4_10
AAA_33
AAA_5
SRP54
LdpA_Fe-S-bd
Fer4_4
ORC-CDC6-like
Fer4_16
Fer4_7
Fer4_21
AAA_24
Fer4_8
Fer4_17
UDG-inhib_P56
DLIC
Motif
Other DBs
NCBI-GeneID:
129889552
NCBI-ProteinID:
XP_055820884
LinkDB
All DBs
Position
5:complement(70505508..70512410)
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AA seq
606 aa
AA seq
DB search
MSDQRLTRIAIVSADKCKPKKCRQECRKGCPVCKVGKLCIEVTVASKIAFISEELCIGCG
ICVKKCPFEAIQIINLPKDLNKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTA
LKVLAGKLKPNLGRFSNPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKA
VQGNVGQVLDQKDERDVKEKLCVDLELNQVLDRNVGDLSGGELQRFAIAVVAIQNAEIYM
FDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVV
TLPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQETAEEIESYARYRYPTMTKTQ
GNFKLKVAEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDVVEGSDVEIPEFNVSYKP
QKISPKFQSTVRHLLHQKIRDSYMHPQFCSDVMKPLQIEQLMDQEVVNLSGGELQRVALA
LCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVI
VYEGTPSIDCVANAPQSLLTGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGS
YYYLDD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcagagattgacccgtatcgccatcgtaagcgccgacaagtgcaagccgaaa
aagtgccggcaagaatgcagaaagggctgcccagtttgtaaagttggtaagttatgtata
gaggtcactgtagcctcgaagattgcttttatctcggaagagctgtgtattggatgtggt
atttgtgtgaagaaatgcccatttgaagcaattcagatcatcaatctaccaaaagattta
aacaaggatacaacccatcgttatggtcccaacacttttaaattgcacaggttacctgtc
cctaggccaggacaggtacttggtctggttggcacaaatggtattgggaagtcaactgcc
ctaaaagttttggctggaaaattgaaaccaaacttgggacgcttcagtaaccctcctgat
tggcaagaaatcttgactcacttccgaggatccgaattgcagaactatttcactcgcatt
ctggaagataacttaaaggcaattatcaagcctcagtatgtcgaccatattccaaaggca
gttcaaggaaatgttggacaagtgcttgaccaaaaagatgagagagatgtgaaggaaaaa
ctctgtgttgatcttgagctgaatcaggttttggatcgtaatgtaggtgatctatctggt
ggagagcttcagaggtttgctattgctgttgttgctatacaaaatgcagagatatacatg
tttgatgagccctcgagttaccttgatgtgaagcagaggcttaaagctgcccaagttgtc
agatccttgcttcgaccaaatagctatgtcattgttgtggagcatgatcttagtgtgctc
gattatttgtcggatttcatttgctgcttatatgggaagcctggtgcatatggggttgtg
accctacccttttcagtcagggaaggaattaatatatttttggctggatttgtgcctaca
gaaaatctacgtttccgtgatgagtctcttacttttaaggttgctgagaccccacaagag
accgctgaggaaattgaatcatatgcacgttacagatatccaaccatgacaaaaactcag
ggtaatttcaagcttaaggttgccgagggtgaatttactgattcacagattgttgtgatg
cttggtgagaatgggactggaaagacaaccttcattcgcatgctggctggtctattaaag
cctgatgtggtggaaggctctgatgttgagataccagagttcaatgtttcatacaagccc
cagaaaattagtccgaaatttcaatccactgtgaggcatttgctacatcaaaagatacgc
gattcttatatgcacccccagttttgttcagatgtgatgaagcctctccaaattgagcaa
ttgatggaccaagaagttgtgaatctttctggtggtgagttgcaaagagttgccttagcc
ctgtgccttggaaagcctgctgatatatatctgattgatgagccaagtgcctatcttgat
tctgagcagcgtattgtagcttccaaagtcatcaagagattcattcttcacgcgaagaag
actgcatttgttgtagagcatgactttataatggcaacttacctggcagatagagtcatt
gtatacgaggggacgccttccatagattgtgttgcaaatgcacctcaatcactgttgact
ggaatgaacttatttttatcacatctgaacattacatttagaagggacccaactaatttt
cgtccaagaatcaacaaactggaatcaaccaaggatagagagcagaagtcagctggatcc
tattattatttggatgattaa
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