Solanum dulcamara (climbing nightshade): 129889694
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Entry
129889694 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129889694
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129889694
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129889694
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129889694
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129889694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF755
Motif
Other DBs
NCBI-GeneID:
129889694
NCBI-ProteinID:
XP_055821079
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All DBs
Position
5:complement(72933577..72938673)
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AA seq
721 aa
AA seq
DB search
MKTLCSETPVTGSKPVALVSSDETLDGSSPISDDDGNLPSSENPANSIESEELCMEEEEL
DASPVRTYSAPYYCSRWAQPWGKITNSKPLYSQPAAAEPEDEPSPENEPSPFDWTDGSSE
SKVEPNKSVPVELQWNSYRDEEAKCLLGAGLANLGNTCYLNAVLQSFMHTVPLIQGLKSI
DHTTPCNSYLKGFCVICALRKLIDASLFSEAGVVSPWKFVNNLNYFSSTFHRFQQEDAHE
FLQCFLDKLERCCDDSRPKDCQTLETDNIVKQAFGGRLVSKLRCCNCGHCSDTYETLIDL
SLEIEDVDSVDTALESFTKVEKIEDSETKFTCEKCKEQVSIEKQLVLDKAPSVAALHLKR
FKTDGSIVEKIDKYVSFPLELDLHTYADNNQVDNEEMKYDLYAVIVHIGFSYCSGHYYSF
IRSAPNEWYKFDDSKVVHVREDYVLSQEAYVLFYAKRGTPWFSDFIEGQKPFIDPSIRST
SPKSVLENTDAVCVPSPLLPNAQAFDVKESNDAANESSPNSLNKVQDSEGKENVQMMSTP
RPPLGASNILYSKSREVDKVSSPSVLKDVSKPISRVSVLKESCSTLDPGSTSRTLYITPE
TPPRSPSPEIYREDPPDNDYHIPCGHLRTVGQVSCKKQLQKDLEQDMERKQACSLIKKNM
PGSRAQQLLAAVQGSCSEGSANKKRRRRMEVSPTRDDTNSTSRRRSSIGSTMRTVMAGSM
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctttgctcagaaaccccagtaaccggctctaaaccggttgctttagtaagt
tctgatgaaaccctagatgggtcttcaccaatttctgatgatgatggaaatctaccgagt
tctgaaaacccagccaattctatcgaatcggaagagctatgtatggaggaggaagaattg
gacgcatcacctgttcgtacatactctgctccatattattgcagccgttgggctcagcct
tggggtaaaatcaccaactccaagcctctgtattcacaaccggctgctgctgagcctgag
gacgagccatctcctgagaatgagccatcgccttttgattggacggacgggtcttcggaa
agtaaagtagaacctaacaagtcggtaccagttgagttacagtggaattcttacagagac
gaggaagctaagtgtttgctgggtgcagggcttgctaatttaggcaatacatgctatcta
aatgcggttttgcaatcgttcatgcatacagtacctctgattcagggccttaagtcgatt
gatcacaccacaccatgtaatagttacctgaagggattctgtgtaatttgtgcactgaga
aagctgattgatgcttcgctgttttctgaggctggtgtagtctctccctggaaatttgtt
aacaacttgaactatttttcttccactttccatcggttccaacaggaagatgctcacgag
tttctacagtgttttctggataaacttgaaagatgttgtgatgattcaagaccaaaagac
tgccaaactttggagactgacaacattgtgaaacaggcttttggaggtcgtttagttagc
aaattgcggtgttgtaattgtggccattgttctgacacatatgagactctaatagatctg
agtttagagattgaagatgttgacagtgtagacacagctctagagtccttcacaaaggtt
gaaaaaattgaggactcagaaacaaagttcacatgtgaaaaatgtaaggagcaagtctcc
atcgagaagcagcttgtgttggacaaggctccctctgttgcggcccttcatctaaagaga
ttcaaaacagatggttctattgttgagaagattgacaaatatgtatcatttcctctagaa
ttggacttgcatacttatgctgataacaaccaagttgataatgaagaaatgaagtatgat
ctttatgcagttatagtgcatataggattttcatactgttctgggcactattacagcttc
attcgttctgctccaaatgaatggtacaaatttgatgactcaaaggttgttcatgttcga
gaagattatgttttgtcacaggaagcatatgttctattttatgcaaagaggggcactcct
tggttttcggattttatagaagggcaaaagccctttatagatccgtccatccggagtact
tctcccaaatcggttttagagaatacagatgctgtctgtgttccttctccgcttctgcca
aatgcccaggctttcgatgtcaaagaatccaatgatgctgcaaatgagtcatctcccaat
tctctcaacaaggttcaggatagtgaaggaaaggaaaatgtgcagatgatgtctactcct
agaccaccacttggtgcaagtaatattctgtattccaagtcacgtgaagtggataaagtg
tcgtcaccttcagtactcaaagatgtgtctaaaccaatttccagggtttcagtactcaaa
gaaagctgcagtactctggaccctggttcaaccagcagaactttatatatcacacccgaa
acaccgcctagatctccaagcccggagatatatagagaagatcccccagataatgattac
catattccttgtggccatctaagaacggtaggccaggtttcttgcaaaaagcaactgcag
aaggacctagagcaggacatggaaagaaagcaggcatgctctctgataaagaaaaacatg
cctgggtctagagcccagcaattactagctgctgtgcagggttcgtgcagtgaaggttct
gctaataagaagaggaggagaagaatggaagtatctccaactagagatgacactaattcc
accagtcgccgaaggtctagcattggctctacgatgcgtactgtaatggctggcagcatg
agataa
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