Solanum dulcamara (climbing nightshade): 129889698
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Entry
129889698 CDS
T09577
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04016
MAPK signaling pathway - plant
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
129889698
04075 Plant hormone signal transduction
129889698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129889698
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129889698
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
bHLH_INO4
Bap31_Bap29_C
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
129889698
NCBI-ProteinID:
XP_055821081
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Position
5:72978966..72981530
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AA seq
696 aa
AA seq
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MTEYSLPTMNLWNNSTSDDNVSMMEAFMSSDISFWATNSTTTNTAAVNSNLLHTNNTPCV
FPPSSSTSACASTVTAAAAPVDASKSMPFFNQESLQQRLQALIDGARETWTYAIFWQSSA
VDFSSPSVLGWGDGYYKGEEDKAKRKLPVSSPAYIAEQEHRKKVLRELNSLISGTQTGTD
DAIDEEVTDTEWFFLISMTQSFVSGSGLPGQALYSSSPTWVAGTEKLAASHCERVRQAQG
FGLQTIVCIPSANGVVELGSTELIIQSSDLMNKVRVLFNFSNDLGSGSWAVQPESDPSVL
WLTDPSSSGMEVRESLNTVQTNSVPSSNSNKQIAFGSENNHTTTQSGNGHSSYNQQQQHN
PPQQQTQGFFTRELNFSEFGFDGSSNRNGNSSVSCKPESGEILNFGDSTKKSACSANGNL
FSGQSQFGAGEETNKNKKRSATSRGSCEEGMLSFVSGTVLASSGVKSGGGGGEDSEHSDL
EASVVKEADSSRVVEQEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP
NVSKMDKASLLGDAISYINELKSKLHNTESDKEDLKIQIEDIKKELASKESRRPGPPPPN
QDLKMSSHTGGKIIDVDIDVKIIGWDAMIRIQCNKKNHPAARLMAALMELDLDVHHASVS
VVNDLMIQQATVKMGSRHYTEEQLRIALTSRIAETH
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatacagcttacccaccatgaatttgtggaacaatagtactagcgatgacaac
gtttctatgatggaagcttttatgtcgtctgatatttcattttgggctactaattctact
actactaatactgctgccgtcaattcaaatcttcttcatactaataataccccatgtgtt
tttcctccatcttcttctacatctgcttgtgcatccactgtaacggctgctgctgcgcct
gtggatgcttccaaatctatgccctttttcaaccaagaatcactccagcagcgtcttcaa
gccctcatcgacggtgctagggagacgtggacctacgctatcttttggcaatcgtctgct
gttgatttctcgagtccgtctgtgttgggttggggagatggttattacaaaggtgaagaa
gataaagccaagaggaaattaccggtttcttctccagcttatattgctgagcaggagcac
cggaagaaggttctccgggagctgaattcgttgatttccggaacacaaaccggtaccgat
gatgctattgatgaagaagttaccgacaccgaatggttctttttaatctccatgactcaa
tcgtttgtcagcggaagcgggcttccgggtcaggctttgtacagttccagccctacttgg
gtcgccggaactgagaaattggctgcttcccactgcgaacgggttaggcaggcgcaaggg
ttcgggcttcagactattgtctgtattccatcagctaacggcgtggttgaattgggatcg
acggagttgataatccagagttctgatctcatgaacaaggttagagtattgttcaacttc
agtaatgacttggggtctggttcatgggctgtgcagccggagagcgacccgtcggtgctt
tggctcactgatccatcgtcctcaggtatggaagttagagagtctttaaacacagttcaa
acaaattcagttccatccagtaatagtaataagcaaattgcttttgggagtgagaacaac
catacaaccacacagtctggaaatggtcacagttcttataatcagcaacaacagcacaat
cctcctcagcaacaaacacaaggatttttcacgagggagttgaatttttcggaattcggg
ttcgatggaagtagtaataggaatgggaattcatcagtttcttgcaagcctgagtcaggg
gaaatcttgaattttggtgatagtactaagaaaagtgcttgtagtgcaaacgggaacttg
ttttcgggtcagtcccaatttggggcaggggaagagactaataagaacaagaaaagatca
gctacttccaggggaagctgtgaagaaggaatgctttcatttgtttcaggtacagttttg
gcttcttccggtgtgaagtcaggcggaggtggaggcgaagactctgaacattcagatctt
gaggcttcggtggtgaaagaagctgatagtagtagagttgtagaacaggaaaagaagcca
aggaagcgaggaaggaagccagctaatggacgggaggaacctttgaatcacgtcgaggca
gagaggcaaaggagggagaaattgaaccaaagattctatgctcttagagctgttgtacca
aatgtgtcgaagatggacaaggcatcacttcttggagatgcaatttcatatataaacgag
ttgaaatcgaagcttcataatacagagtcagataaagaagacttgaagatccaaatagaa
gatataaagaaagaattagctagtaaagaatcaaggcgccccggtcctccaccaccaaac
caagatctcaagatgtctagccacaccggaggcaagattatagacgtggatatagacgtt
aagataatcggatgggatgcaatgattcgtatacaatgcaataaaaagaatcatccagcc
gcaaggttaatggcagccctcatggaattagacctagacgtgcaccatgccagtgtttca
gttgtcaacgatttgatgatccagcaagccacagtgaaaatgggtagcagacattacact
gaagagcagcttaggatagcattgacatcgagaattgctgaaacacactaa
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