Solanum dulcamara (climbing nightshade): 129889729
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Entry
129889729 CDS
T09577
Name
(RefSeq) two-component response regulator-like APRR2 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129889729
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129889729
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Response_reg
Motif
Other DBs
NCBI-GeneID:
129889729
NCBI-ProteinID:
XP_055821113
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Position
5:complement(73481240..73487774)
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AA seq
557 aa
AA seq
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MICIEDELLGWKDFPKGLKVLLFDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSK
SEGFHVAIVEVSAGNSDGVLRFLESAKDLPTIMTSNIHSISTMMKCIALGAVEFLQKPLS
DDKLKNIWQHVVHKAFNTRKDVSRSLEPVKESLLSMLQLQPAKCEADDKNSNGTEPLTAV
AESNTEHSSGCDKYPAPSTPQLKQGVRSVDDADCHDHTIFSTDQDSGEHDGDTKSVETTY
NNSLAENTVQISPPGQQGEIILKEENVSSPPQKMEANIATSSQSNDCPDNSISHSAEPSK
ASDPHSSSGTKSNKKKMKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNV
ASHLQKYRMQRRQILPKEVERRWPHPQPRDSVQRSYYPHKPIMMFPQYHSNHVAPGGQFY
PAWVPPASCPNGLQVWGSPYYPGWKPAETWHWTPHPGLHADTWGSPVMSPSFGSYPQNAG
VYRPHGVHNRYSMLEKSFDLHPAEEVIDKVVKEAITKPWLPLPLGLKPPSTESVLDELSK
QGISTVPPQINRSRCRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcattgaggatgaattattgggttggaaagatttcccaaagggacttaaagtc
cttctttttgatgaagacagcaactctgctgctgagatgaaatcaaggcttgagaaaatg
gactacatagtctactcgttctgcaatgagagtgaagctttgactgcaatctcaagcaaa
tccgagggctttcatgtagccattgtggaggtaagtgcaggcaacagtgatggggttctc
cgatttcttgaaagtgccaaagatctaccaactataatgacatcaaatattcattctatc
agcacaatgatgaagtgtattgcgctgggtgcagttgagttccttcagaaaccattatca
gatgataaactcaaaaatatatggcagcatgtagttcacaaggcattcaatactagaaaa
gatgtgtccagatcacttgagccggtaaaagaatctctcctctcaatgctacagttacaa
ccagcaaagtgtgaagcagatgacaaaaattcaaatggaacagaacctctcactgcagta
gcggaaagcaataccgaacattcgtcgggctgtgataaataccctgctccctcaacccca
caattgaaacaaggagtgcggtcagtggatgatgctgactgccatgatcatactattttc
tcaactgaccaagacagtggggaacatgatggtgacactaaatccgtcgaaactacttat
aacaattcacttgctgagaatactgtccaaataagtcctcctggacaacaaggagagata
attttgaaagaggagaatgtttcatctcctcctcaaaagatggaggctaatattgccacc
tcttcacaaagtaatgactgccctgacaatagcattagtcattctgctgaacctagtaaa
gcatctgatcctcatagttcaagtgggactaaatccaataagaagaagatgaaggtagat
tggacacctgaactacacaagaagtttgttcaagcagtagagcaacttggtatcgatcaa
gccattccttctcgaatactggacttgatgaaagtagagggcttaacaagacataacgta
gccagccatctccagaaatacagaatgcaacggaggcaaattttgccaaaggaggtagaa
aggagatggcctcatccgcagcctagagattcagtacaaaggagttactatcctcataaa
cctattatgatgttcccacaatatcattctaatcatgtcgccccaggtggtcaattttat
cctgcttgggtaccaccagcaagttgtccgaacggtttacaagtgtggggttcaccttac
tatcctggatggaagcctgcagagacttggcactggacgcctcatccagggctgcatgct
gatacatggggctcccctgtcatgtcaccatcgtttggatcatatcctcagaatgctgga
gtgtaccgacctcacggagtgcataacagatatagcatgctagagaagtcgtttgatctt
cacccggcagaggaggtaattgataaagtagtaaaggaggcaataaccaaaccatggtta
ccacttcctttgggcctaaaacctccttctacggagagcgttctcgatgaactttctaaa
caagggatctcaaccgtccctccacaaatcaaccgctcccgctgtcggagatga
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