KEGG   Solanum dulcamara (climbing nightshade): 129889777
Entry
129889777         CDS       T09577                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03420  Nucleotide excision repair
sdul03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    129889777
   03460 Fanconi anemia pathway
    129889777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdul03032]
    129889777
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129889777
DNA replication proteins [BR:sdul03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    129889777
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129889777
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 129889777
NCBI-ProteinID: XP_055821199
LinkDB
Position
5:74093314..74100645
AA seq 952 aa
MVQFHEHIITELLEDSNGGLIVTSSGLGLHKLISSLFLLHHHSQGCLLILSATPPQKSSI
LRNYENDIQSQISGEVPNLPSEITSDLPANQRLSLYTSGGILFITSRILIVDLLTHRLPT
TAVAGLVILNAHSLSDTSTEAFIVRILRSTNRSLYVRAFSDRPHSMVSGFAKAERTLKCL
FLRKLHLWPRFQVYVSQDLESDPPEVVDIRVPMSTYMIGIQKAVIEVMDACLKEMRKTNK
VDVEDLTVENGLFKSFDEIVKRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVTY
LKYLDSLRASESFRSVWIFAESSYKIFEYAKKRVYHFGRSDSGKLGLSKTVSTKKRKLND
SKKDEDQSTSAESRVVLEEVLEEPPKWKVLLDVLVEIQEERDKQASSGEEKDHLGDGDDN
GIVLVACKDEYSCMQLEDCITNGSQKVMREEWEKYLLSKVQLQALPKRNAKKAKEPKGFG
VLDGVVASPGKKAEVSSISKQEHDALLAAASEVSKRINKDIIGEGDNQKHVDGVGSVKGK
GKGKKKKGSAGEKTNNDVAPEENAMEGRCLNEVFLRKHDQGLDVESSRETKKIPPVVFYA
LESDKKILDILKPSTIIAYHPDIAFVREVEIYKAENPSRKVKVYFLFYEDSTEVQKFEAS
VRRENGAFESLIRQKSLMMIPVDQEGRCLGLNSSNEPQSVISQNHITRKAGGRREAEREM
QVIVDMREFMSTLPNVLHQKGMRIIPVTLEVGDYILSPFICVERKSISDLFGSFASGRLY
HQVEMMSRYYRIPVLLIEFSQDKSFSFQSASELGDDVTPNSIISKLSLLVLHFPRLRIIW
SRSLHATAEIFASLKSNQDEPDEVKAIRVGVPSEEGVVENDVRAENYNTSAVEMLRRLPG
VTDSNYRAIMAGCKSLAELAMLPVERLAELMGGQKAAKMLREFLDAKYPTLL
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggtgcaatttcacgagcatataatcacagaacttctagaagattccaacggtggttta
atagttacctcatcaggtctcggtcttcataaactcatatcctcccttttccttctccac
caccactcccaaggctgcttacttatcctctctgccactcctcctcagaaaagctccatc
ttacgaaattacgaaaatgacattcaatcccaaatctctggtgaagttccgaatttaccg
tcggagatcacttcagacttgccggcgaaccagaggctgtcactgtacacttccgggggc
attttattcatcacttcccggattcttattgttgacctgttgacacatcgtcttccgaca
actgctgttgccggacttgttattctcaacgctcattcgctttcggatacgtcaacagag
gcatttattgtacgtattttgcggtcaacgaatcgttctctctatgttcgtgcattctcc
gatcgtcctcattctatggtttctggttttgctaaagctgagagaacgcttaaatgcctt
ttccttagaaagcttcatctttggcctcgattccaggtttatgtatcccaggatttggag
agtgatccaccagaggttgtggatataagggtaccgatgtcaacatatatgattgggatt
cagaaagcagtgattgaggtgatggatgcatgtttgaaggaaatgagaaagactaataag
gttgatgtagaagacttgacagtggagaatggtttgtttaagtcgttcgatgagatagtg
aaaaggcagctagatcccatctggcataccttagggaagagaacgaagcagcttgtttca
gatttaaagacattaagaaagctgttggattaccttgttaggtatgatgctgtaacttac
ttgaagtatctagactcacttagagcatcagagagtttccggtccgtctggatatttgca
gagtccagttacaagatctttgagtatgctaaaaagcgagtttatcattttgggaggtca
gatagtggaaaactggggctgagtaagactgtatcaaccaaaaagagaaagcttaatgac
agcaagaaggatgaagatcagtcaacaagtgcagagagcagggtcgttttggaggaagtc
ttggaggagccaccaaagtggaaggtcttacttgatgtcctagtggagatacaagaggaa
agagataaacaggcatcgtctggagaagagaaagatcatctgggtgatggggatgacaat
ggaattgttttagttgcttgcaaagatgaatactcatgcatgcaactcgaagattgcatc
acaaatggctcacagaaggtcatgcgtgaagagtgggaaaagtatctgttgagcaaggta
cagctgcaagcattgccaaaacgcaatgccaagaaagctaaagagcctaaagggtttggg
gtacttgatggtgttgttgcatcacctggaaagaaagcagaagttagtagcataagcaag
caggagcatgatgcactgctggcagctgcatctgaagttagcaaaagaatcaacaaggat
attattggtgaaggtgataatcagaaacatgtggatggtgtaggttctgtaaaaggaaag
ggtaaaggaaagaaaaagaaaggttcagctggtgaaaaaaccaacaatgatgtggcacct
gaagaaaatgcaatggaaggcagatgtttgaatgaagtgtttcttcgaaagcacgaccaa
ggtctggatgttgagtcttcaagagaaactaagaagatcccaccagtggttttctatgcc
ttggagagtgataaaaaaattcttgatattttgaagccctctaccattattgcttaccat
cctgatattgcatttgtgagagaggttgagatctataaagctgagaacccttcaagaaag
gttaaggtgtactttctcttctatgaagactctactgaggtgcaaaagtttgaggcaagt
gtgcgtagagaaaatggagcatttgagtcccttataagacagaaatcactgatgatgatc
ccagtagatcaggagggacgttgtctgggactgaattcctccaatgagcctcagtccgtt
atatctcaaaatcatataaccagaaaagctggtggaagaagagaagcagaaagggaaatg
caagtcattgtggacatgagagagttcatgagtactcttcctaatgtgcttcaccagaaa
ggcatgcgcattataccagtgaccctggaagttggtgattacatactttctccgtttata
tgcgtagaaagaaagagtatctctgatctatttggcagttttgcatcgggccgtctttac
caccaggtggaaatgatgtcacgttattaccggattcctgttcttcttattgagttttca
caggataaaagcttttcatttcagtcagctagtgaacttggtgatgacgtaaccccaaat
agcattatctcaaagctttccttgcttgttctccactttcctcggcttcgcattatctgg
tctcgtagtctgcatgcaaccgccgaaatatttgcatctcttaaatcaaaccaagatgaa
cccgatgaggtcaaggccattagagtgggtgtaccatcagaagagggtgttgttgaaaat
gatgtcagagctgagaattataatacatctgcggtagagatgttgagacgtctgccaggt
gtgacagattccaactatagggcaataatggctgggtgcaaaagcttggcggaacttgcc
atgcttccggtggagagattagcagaattgatgggtggtcagaaggctgccaaaatgtta
agggaattcctcgatgcaaaatacccaaccttgctctaa

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