Solanum dulcamara (climbing nightshade): 129889919
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Entry
129889919 CDS
T09577
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129889919
Enzymes [BR:
sdul01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
129889919
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
129889919
Prokaryotic type
129889919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
Motif
Other DBs
NCBI-GeneID:
129889919
NCBI-ProteinID:
XP_055821368
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All DBs
Position
5:complement(76138862..76143075)
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AA seq
488 aa
AA seq
DB search
MASTVQVVQLGRIRVLKKGSGPVVGPVVYWMFRDQRIRDNWALIHAVDQANKANVPVAVA
FNLFDQFLGAKARQLGFMLRGLEKLQGNLESTLQVPFFLFQGEAIDTIPNFLKECGASLL
VTDFSPLRDVRGWKDKICERVDESVTVHEVDAHNIVPLWVASDKLEYSARTIRGKINKLL
PEYLIELPAIEPPKIKWSSSNPPIDWPKLISDVVRKGAEVPELEWCEPGEDAALEVLMGS
KKGFLTSRLKNYSTDRNNPLKPQALSGLSPYLHFGHISAQRCALEARKVRKNYTQAVDTF
LEEMIVRRELADNFCYYQPHYDSLLGAWEWARKTLMEHASDKREHKYTREQLEKAQTADS
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTNGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFNVDGYISYVKRLVGESKKRKAEVFLD
KAAKDLRS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacggttcaagttgttcagttgggtcggatccgggttctgaagaaaggatca
ggaccggtggttggaccggtggtgtattggatgtttagagatcaacggataagagataac
tgggcgttaatccacgccgttgatcaagctaacaaggcaaatgtacctgtagctgttgct
ttcaatttgttcgatcagttcttaggtgctaaagctagacagttagggtttatgcttaga
ggccttgagaagcttcagggcaacctcgaaagtactcttcaagttccgttttttctattt
cagggagaagctatagacacaattcccaattttttgaaagaatgtggagcttctcttcta
gtaacggatttctcacctttgagggatgttcggggttggaaagataagatttgtgagagg
gtggatgaatcagtgacagtacacgaggttgatgcacacaacattgttcctctttgggtg
gcatcagataaattggaatacagtgctagaaccatacggggtaaaataaataagctgctt
cctgagtatctgattgaattacctgcaatagagcctcccaagataaagtggtcttcttca
aaccctccaatagattggccaaaactaatttcagatgttgtaaggaaaggagcagaagtt
cctgaacttgaatggtgtgaaccaggtgaagacgctgcattggaagtgctaatgggaagt
aaaaaagggttcctgacttccaggttgaagaattattcaacggaccggaacaaccctctg
aaaccccaagcactttctggcctctctccttatttgcactttgggcatatatcagcgcag
agatgtgctttagaagcacgcaaagttcgaaaaaattatacccaggcagttgacacattt
ctggaggaaatgattgtgcggagagagcttgctgataacttctgctattaccagcctcat
tatgattcattactcggtgcatgggaatgggcgcgtaagaccttgatggaacatgcatct
gataaacgggaacataaatacacgcgagagcaattggagaaggcgcaaactgcagactct
ctttggaatgcttctcaattagagatggttcattatggaaaaatgcatggttttatgagg
atgtattgggctaaaaagatactcgaatggacaaatggaccggaagaagctctggctatc
acaatatatttaaatgataagtatcatatagatggaagagatcctagtggttatgttgga
tgcatgtggtcaatatgtggcgtacatgaccagggttggcgagagcgcccggtgtttggg
aaaatcaggtacatgaactatgcaggttgcaagaggaaattcaacgtggatggatatatt
tcatacgttaagaggctagtaggtgaaagcaagaaaagaaaagcagaagtatttttagac
aaggcggcaaaagacttgcgcagttag
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