Solanum dulcamara (climbing nightshade): 129890026
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Entry
129890026 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129890026
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129890026
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdul01001
]
129890026
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129890026
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129890026
Protein kinases [BR:
sdul01001
]
Serine/threonine kinases: Other
RIO family [OT]
129890026
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-40S particles
Kinases
129890026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase
Pkinase_fungal
B3R
TCAD9
SEEEED
Nop53
Motif
Other DBs
NCBI-GeneID:
129890026
NCBI-ProteinID:
XP_055821489
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All DBs
Position
5:77483703..77490417
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AA seq
551 aa
AA seq
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MAELVLKLEIPEDEELEELEEEELLWCSDSEIGEALDYLDTRDNSESINGAFSLQTRRPN
AHGGLHTRPNSSALQPLSNRTQKFANHIRASPLEEWEGRIKVGMSNSVTTAIRGSVRDMA
IGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKADGQ
ELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPRKMVKTWAEKEMRNLMRLRAAGIR
CPAPILLRLHVLVMEFIGKGGWAAPRLKDAALSLDKLRECYVEIIMAMRTLYQKCKLVHG
DLSEYNILYFEGHLYVIDVSQSVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFD
FIVDPSINDDSVDSYLEKVQERILARGEMTAEEEIADSVFIQSFIPKTLDRVKDAEADVQ
RIISGEDTADMYYKTITGLKQALSGTNPSTENQQHQQIDERGLDANAAAEIDKPSDGESE
PETESDDDDDESDCSEGSSSDGEKPTAADKKAARKENKKKVKEEKREARKHKVPKAVKKK
KKKLAKAKKYR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacttgttctcaaattagagatacctgaagatgaagaattagaggaattggaa
gaggaagagttattatggtgttccgattctgaaattggtgaagctttggattatctggac
acaagagataattctgaatcgataaatggagcttttagtctccaaacaaggcgcccaaat
gctcatggaggacttcatactcgacccaattcttctgctttacaacccctttctaatcgt
acccagaaatttgctaatcatatcagagcttcaccattagaggaatgggaagggaggatc
aaagttggcatgtcaaattctgtgactactgcaattcgtggaagtgtccgggatatggct
attggtaaaactaaaacgactgagaaagcagaccgcgccactgttgaacaggcaattgat
ccaagaacccgaatggttttgtttaaaatgctcaatcgcggtgtctttcatgatattaat
ggctgtatttcaactgggaaagaggccaatgtttatcatgcaacaaaagccgatggtcag
gaactggcgatcaaagtatacaaaacttcagttcttgttttcaaggatagagatcgctat
gtacagggtgactatcgcttcagatatggatactgcaagcacaatccacggaaaatggtt
aaaacatgggctgagaaagaaatgaggaatctgatgaggttaagggcagctggaatcagg
tgcccagctccaattctcttgaggcttcatgttctcgttatggaattcatagggaaagga
ggctgggcagcacctcgactaaaggatgctgctttatctcttgacaagttacgtgaatgt
tatgtggagataattatggcaatgagaactctgtatcagaaatgcaagctggtgcatggc
gacttaagcgagtataacatcctatatttcgagggtcacctatatgttattgatgtttca
caatcagttgatcttgaccatcctcatgcacttgatttcctccgagaggattgtgtacat
gtttctgacttctttaaaaaacatggcgtggctgttatgacaatccgggagttgtttgat
tttatagttgatccttctattaatgatgattcagtggatagctatttggagaaggttcaa
gagagaattttggctagaggtgagatgactgctgaagaagaaattgctgactccgtattt
attcagtcatttattcccaagactcttgatcgtgtgaaagacgctgaagcagatgttcaa
cgcattattagtggtgaggacacagcagacatgtactacaaaactattacaggtctgaag
caggctctctcagggacaaacccttcaacagaaaatcagcagcaccaacaaattgacgaa
cgcggattagatgccaatgctgcagctgaaattgacaaaccatctgatggtgaatcagag
ccagagaccgagtcagatgatgacgacgatgaaagtgattgtagtgaaggctcatcatct
gatggagagaaaccaacagctgctgataagaaagcagctagaaaagagaacaagaagaaa
gttaaagaagagaaaagggaagcgcggaaacataaagtaccaaaagctgtgaagaagaag
aagaaaaagttggccaaggccaagaagtataggtaa
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