KEGG   Solanum dulcamara (climbing nightshade): 129890048
Entry
129890048         CDS       T09577                                 
Name
(RefSeq) lysine-specific demethylase JMJ17
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sdul01009]
    129890048
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdul03036]
    129890048
Enzymes [BR:sdul01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     129890048
Protein phosphatases and associated proteins [BR:sdul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129890048
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129890048
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID PHDvar_NSD KDM5_C-hel BT_3657-like_N AGO_N
Other DBs
NCBI-GeneID: 129890048
NCBI-ProteinID: XP_055821530
LinkDB
Position
5:complement(77646317..77672782)
AA seq 1839 aa
MGRGRPRAVEKGVLGQNTSASPSGLLNIPPGPVYYPTEDEFKDPLEFIYKIRPEAEKYGI
CKIVPPKSWKPPFALDLNSFTFPTKTQAIHQLQARCASCDPKTFELEYNRFLEDHCGKKA
KKRIVFEGEDLDLCKLYNFVKRFGGYDKVVKEKKWGEVFRFVRPAGKISECAKHVLFQLY
LEHLYDYEEYYNKLNKLGNRSCRRGNQSERKRESDSQSSSSKRRRKNSEGDQTETCKAKE
EEHDQICEQCKSGLHGEVMLLCDRCNKGWHLYCLSPPLKQIPPGNWYCLQCLNSEKDSFG
FAPGRELPLDAFRRIADRAKKKWYGSTSISQVQLEKKFWEIVEGSAGEVEVKYGSDLDTS
IYGSGFPRLTDEKPSSVEPGTWDEYCASPWNLNNLPKLPGSMLRAVHHSIAGVMVPWLYI
GMLFSSFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEAPAFEKVMRNSLPDLFDAQPDLL
FQLVTMLNPRVLQENGVPVYKVLQEPGDFIITFPRSYHGGFNCGLNCAEAVNFAPADWLP
HGGFGAELYQLYRKAAVLSHEELLCAVARSEFDSKAAPYLKTELVRVYSKEKTWRERLWK
NGIVNSSPMPPRMKPEYVGTEEDPTCIICQQYLYLSAVACSCAPSSFVCLEHWEHLCECK
PQKRQLLFRHTLTELNDMVLITDKSNHEEAAENIRGQLLSSNDPPALSKKIKGGCITHMQ
LAEEWLIKFSKLFQNPYSSDAYHRAIKEAEQFMWAGHEMDPVRDLVKRLIDAQSWAQNVR
DSLSKVKAWVSDHNSDVVKVQMEVVDNLLSLNPVPCNEPAHLRLKDFQKEASQLTLEIDS
VLSSWSNILVSDLETLYSKTVDCPIYIKGSEELLRKLSSVKAWAERVRKCVSETSARVEA
DILYKLEKENLSLQVQLPEGEMLLDLIRQVECCQSQCCEMLRGSLSVKDLESLLNKWGGF
AVNIPELELLRQYHKDAVSWIARANKILLGISEREDQETVAHELTCIQKDAALLRVKVDE
LPCVDIELKKARCRVKALKAFRCTMSMDYIEQLLMEASILQIEKEKLFTDVYEVKAIAVS
LEERAKRVLENKEDISEFEDVIRASEEIFVILPSLDEVKYAVSMAKSWLSRSHPFLSRDS
TALGSIPSLEVETLKILVSESKLLKVSLRELLMIQTLLDTCTRWEQDACSVLHDTEWLLN
VETIDDAILSKLDKIEKQIQAIDSFVEAGQGLGFKFDMIPKLQDACSTLRWCFRALSFAT
EIPTLEELKTNLEIASHLPLMYTTCSLCIALIDWVNWLNRALEVCIQSTAGRSNLSDAEE
VLRQYQNICVSSPAMISQLQKAIEKHNSWLDQVHSFFVLNFRDRSWDLLLQLKEKGNNDA
FSCSELDMVFSEVHKTEEWKRRCEEVLHPSVRDAHLLTALLQTKNALERSINICGKSNHT
NARASCIFCSLDGVNQKLLTCSTCNDCFHLKCIGWSPGDANDSKKFICPYCHFMNSGKIS
RNASDPLNIGRKSLKLHKLVELLSDAEDLCLWIQERAVLHQIVQKALDFKARIEEIVKFV
LAYPDKDLSIIAKKFCVALKAVHVGGAYDSEANSKLELALARTSWKIRAQRLLDGSQKPS
IQVLQRHLKEGLAVGIPSEDYFRQILAEVKNIGLQWADIAKKVSTDGGTLGLDKVFELIK
EGENLPVSCEKELKLLRDRSMLYCICRRPYDQRPMIACDKCDEWYHFDCIKLSSLPKIYI
CPACCCMEGEDFASTSTSGEEKVVTGKHEVPQTPSPRHRESRRKSRKTKWERVDVAADAS
RSTSNIEQLFWKNRKPYRRVARKRSHFESLSPFIFVQNS
NT seq 5520 nt   +upstreamnt  +downstreamnt
atggggagagggagacctagagctgtagagaaaggggtgttagggcaaaatacaagtgca
tccccaagtgggttattgaatataccaccagggccagtatattatccaactgaggatgaa
tttaaggaccctttagagtttatttacaagatcaggccagaggctgagaaatatggtatt
tgtaaaattgtcccacctaagagttggaaacccccctttgcattggatttgaattccttc
acatttccgacgaaaacgcaagctattcatcagttacaggctcggtgcgcgtcttgtgat
ccgaagacctttgagttggaatacaataggttcttagaagatcattgtgggaagaaggcg
aaaaaacgtattgtgtttgagggtgaggacctggatttgtgcaagttgtataattttgtc
aagcggtttggagggtacgataaagtagtgaaggagaagaagtggggcgaggtttttagg
tttgttcggcctgctgggaagatttcagagtgcgccaagcatgtattattccaattgtac
ctggaacatttgtatgattatgaagagtactataataagttaaataagctgggaaataga
agttgcaggagaggaaaccaaagtgagaggaaacgggagtcagactcccaatcctcaagt
agtaagagaaggagaaagaacagtgagggtgatcaaactgaaacatgtaaggcgaaggaa
gaagaacacgatcaaatatgtgagcaatgcaaaagtggattgcacggggaggtgatgctt
ctctgtgatcggtgcaacaaggggtggcatctgtactgtttatcaccgcctctgaaacaa
attccaccggggaactggtattgcttgcaatgcttgaattctgaaaaggatagctttggt
ttcgcacctggcagagagttaccattggatgcatttaggcgcattgctgatcgtgccaag
aaaaaatggtatggttccacatcaatttcacaggtgcaattagagaagaagttctgggaa
attgtggagggttcagcgggggaggttgaagtgaagtatggcagtgatttggatacttcc
atctatggtagtggatttcctcgtctaaccgatgaaaaaccatcatcagttgaaccaggt
acatgggatgaatattgtgctagcccatggaacctcaataacttacccaagttgccaggt
tcgatgcttcgagctgtacatcatagcattgctggtgttatggtgccttggctgtatatt
ggaatgctattctcttcattctgctggcattttgaagaccactgcttttactccatgaat
tatcatcactggggagagccaaaatgttggtatagtgttcctggaagtgaagccccagct
tttgagaaggtaatgcgtaatagccttcctgatctgtttgatgcgcaaccagatctgcta
tttcagcttgtaaccatgctgaatccacgtgtgttgcaagaaaatggggttcctgtttat
aaagtgttacaggagcctggggactttattattacctttcccagatcgtatcatggaggc
ttcaactgcggcttaaattgtgctgaggctgtcaattttgcccctgccgactggttacct
catggcggttttggagcagagctttaccaactttatcgcaaagctgctgttttgtctcat
gaagagctgctctgtgcagtagcccggagtgaatttgacagcaaggcagcaccttactta
aaaacagaattggtcagggtctattctaaagagaagacttggagagagcggctttggaaa
aatggcattgtcaattcttctcccatgccgcctcgtatgaagcctgaatacgtgggcact
gaagaggatcctacatgcatcatatgccagcaatatttgtatctttctgctgtagcatgc
agctgtgcaccatcgtcttttgtttgtcttgagcactgggaacatctgtgcgaatgtaag
ccacaaaagcgtcaactcctttttcgtcataccctcactgaattgaatgatatggtgctt
attactgataagagtaatcatgaagaggctgcagaaaatatcagagggcaacttctgtcg
tccaacgatccacctgctttgtcaaaaaagataaaaggtggctgtatcactcacatgcaa
cttgctgaagaatggctaataaagttcagtaagcttttccaaaatccttattcttcagat
gcttatcatcgtgcaataaaggaagccgaacagtttatgtgggctggtcatgaaatggat
ccagtaagagatttggtgaagaggttaattgatgctcagagttgggctcaaaatgtcagg
gactctctctctaaagtaaaagcttgggtgtctgatcacaatagtgatgtagtgaaggtg
cagatggaagttgttgacaatttgctcagtttaaatcccgtaccctgtaatgagcctgca
catctcagattgaaggatttccagaaagaagcgagccagctgactctggagattgattct
gttctttcatcatggtcaaatattcttgtatctgatttggaaaccttgtactccaagact
gtagattgccccatctacatcaaaggaagtgaggaattgttgcgcaagctgtcttcagtt
aaggcttgggctgaaagagtaaggaaatgtgtgtctgagacttctgctagagttgaggca
gatattctctacaagctagagaaggagaatttaagccttcaagtgcaacttccagaaggt
gaaatgctcctagatttaattagacaagttgaatgttgtcaatctcagtgctgtgagatg
ttgagaggttctctcagtgtcaaggatcttgaatcgcttctcaacaaatggggtggtttt
gcggttaacattccagagcttgaacttctgagacaatatcataaagatgctgtgtcttgg
attgcgcgtgctaacaaaattctattgggcatcagcgaaagggaggatcaagaaactgta
gctcatgagttaacttgcattcaaaaggatgcagcattgcttagagttaaagttgacgag
cttccttgtgtggatattgagctaaagaaggctcgttgtagggtaaaagctctgaaggca
tttcgttgcacaatgtccatggattatattgagcagctgttgatggaggctagcatattg
cagattgagaaagagaagttgtttacagatgtttatgaggtaaaggcaattgctgtatct
ttagaggaaagagccaagcgcgtccttgagaataaggaagacatatctgaatttgaggat
gttataagggcttcagaggagatatttgtgatacttccttctcttgatgaggtgaagtat
gcggtatcaatggctaagtcttggctatctaggtcacatccctttctatcacgtgattcc
acggcacttggctcaattccttctcttgaagttgagactttgaagatattggtatcagaa
tctaagcttctgaaggtatctctgagagaactactgatgattcagacattgcttgacact
tgcaccaggtgggagcaggatgcctgctctgtgttgcatgatacagagtggctgttgaat
gtcgaaactatagatgatgcaatattgagcaaacttgataaaattgaaaaacaaattcaa
gctatagactcatttgtagaagcaggtcagggtcttggtttcaagtttgatatgattcca
aaacttcaagacgcttgttctactcttcgttggtgctttagggctctatcttttgctact
gaaattccaacacttgaggaactgaagacaaatttggagattgcgagccaccttcctctc
atgtatacaacttgcagtttgtgtattgccttaattgattgggtgaattggcttaataga
gctttggaagtctgcattcaatctactgctggaagatccaacttaagtgacgctgaagaa
gttctcagacagtatcagaacatttgtgtctcatctccggcaatgattagtcagcttcag
aaggctattgagaaacacaactcatggctggatcaggtgcattcattttttgtccttaac
tttagggatcgatcatgggatctgttgctgcagcttaaggaaaaagggaataatgatgcc
ttcagttgctcagaattggacatggttttctctgaggttcataagacagaggagtggaag
cgccggtgtgaggaggtcttacacccttcagttagagatgctcacctgcttactgctctt
ttacagactaaaaatgcacttgagagatcaatcaacatttgtgggaaatctaatcacacc
aatgcaagggcgtcatgtatattctgctcacttgatggtgtgaaccagaagcttttgaca
tgttctacttgcaatgactgctttcacttgaagtgcattggatggtcaccaggagatgcc
aatgattcaaaaaaatttatttgtccttattgtcattttatgaacagtggaaaaatatca
agaaatgcaagtgatcctctgaatattggaaggaaaagtctcaagttgcacaagctcgtt
gagctcttatcagatgctgaagatctatgtttatggattcaggaaagagctgtacttcat
caaattgttcaaaaagctctcgatttcaaagctcgcatagaagagattgtcaagtttgtt
ttagcttatccagataaagaccttagcattatcgctaaaaaattctgtgttgctttgaag
gctgtacatgttggtggtgcctatgattctgaggcaaacagcaaacttgagttggcatta
gcaagaacatcctggaaaatcagagctcagagattattagacggttcacagaaaccctca
attcaagtgcttcaacggcatttaaaagagggactagctgtcggcattccttcagaagat
tattttagacagatcctggcagaagtgaagaacattgggttgcagtgggctgatattgca
aagaaggtttcaacagatggtggcacacttggattggataaggttttcgagctcatcaag
gagggtgaaaatttacccgtgtcatgtgaaaaggagcttaagttacttagggatcggagt
atgctttattgcatttgtcggagaccttatgatcagagaccgatgattgcttgtgataaa
tgtgatgaatggtatcattttgattgcatcaagttatcctcactgccaaagatctacatc
tgtcctgcatgttgttgcatggaaggagaggattttgcatcaacgtcaacaagcggcgaa
gagaaggttgtcactggtaaacatgaggtacctcagacaccttctccgcgacacagagaa
tcaagaaggaaatcaagaaaaaccaaatgggagagagttgatgttgctgctgatgcatca
agaagtactagtaatattgaacagttgttctggaaaaataggaaaccttatagacgagta
gctcgtaaacgatcacattttgagagcttgtctccttttatttttgtgcaaaatagttaa

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