KEGG   Solanum dulcamara (climbing nightshade): 129890237
Entry
129890237         CDS       T09577                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03010  Ribosome
sdul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    129890237
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129890237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sdul03011]
    129890237
   04121 Ubiquitin system [BR:sdul04121]
    129890237
Ribosome [BR:sdul03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    129890237
  Archaea
    129890237
Ubiquitin system [BR:sdul04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   129890237
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 zf-C4pol Rad60-SLD_2 TBK1_ULD Ubiquitin_5 DUF2604 UBL_UBAC1 Plexin_RBD Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 129890237
NCBI-ProteinID: XP_055821781
LinkDB
Position
5:79691414..79693454
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcaaatctttgtgaaaactctgactggtaaaaccataaccctagaggttgaatccagt
gacactattgacaatgttaaggctaagattcaagacaaggaaggaattcctcctgaccag
caaaggctgatttttgctggtaagcagcttgaagatggccgcactcttgctgactataac
atccagaaagagtcgactttgcatttggtgctgaggcttcgtggaggaattattgaacct
tcattgatggctttggctaggaagtacaatcaggaaaagatgatttgccgcaagtgctat
gctcgcctgcatccccgtgctgtcaactgccgcaagaagaagtgtgggcacagtaaccag
ttgaggcctaagaagaagatcaagtag

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