Solanum dulcamara (climbing nightshade): 129890453
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Entry
129890453 CDS
T09577
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Module
sdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129890453
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
129890453
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
129890453
NCBI-ProteinID:
XP_055821980
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Position
5:complement(9132095..9135795)
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AA seq
395 aa
AA seq
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MAKLLVTSWCCVFFSFGFIFLNSNASSVTYNVLNFGAKPDGKSDATQPFLKAWGAACTSV
KEATIYVPRGKYWIKAVTFRGPCKNKITVKIDGTLVAPSDYRALGNSGYWILFIKVNRIS
VIGGTLDGNGAGFWDCRKSGKNCPVGTRSITFNWANDVVVKDLTSLNSQLTHLVINSCKN
VMVKNVRIIAPDLSPNTDGIHVQSSIGVTITGTSIQTGDDCISIGPGTKNLWMDKIQCGP
GHGVSIGSLARDYNEDGVQNVTLINSVFSGSDNGLRIKSWARASTGFVTNINYQNIMMKN
VDNPIIIDQNYCPNNQGCPNQASGIKINQVTYKNIFGTSSTQVAMSFECSPSNPCSGIKL
QDIKLTYLNNKKAQSICKNIRGTTGGVILPDNCLL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcttttagtaacttcttggtgttgtgtcttcttttcatttggattcattttc
ttgaattcaaatgcatcatcagtaacatacaatgtgttaaattttggagcaaaaccagat
ggcaaaagtgatgcaactcaaccttttttgaaagcatggggagccgcgtgcacctcagtg
aaggaggctacaatttatgttccgcgtggaaagtactggattaaggcggttacttttaga
ggtccatgcaaaaataaaattactgtaaaaattgatggaaccctcgtggctccatcagat
tatcgtgctcttggcaactccggctactggattttgttcattaaggttaaccggatatcg
gtcatcggaggaactcttgatggaaatggagctggattttgggattgcaggaagtcaggg
aagaattgccctgttggaactaggtctataaccttcaattgggcaaatgatgttgtggtt
aaagacttgacctcactcaacagccaactaacgcacttggtgattaatagctgcaagaat
gtgatggttaagaatgtaagaataattgcacctgacttaagtccaaatactgatggcatt
catgtacaatcttcaattggtgttactatcactggcacaagtatccaaactggagatgat
tgtatatctattggtcctggcacaaaaaacctttggatggacaagattcaatgcggccct
ggacatggtgttagcattggaagtctagcaagagattataatgaagatggtgtgcagaat
gtgacattaattaattcagtgttcagtggatctgataatggattaaggataaagtcttgg
gcaagggctagcactggttttgtcacaaacattaattatcaaaacatcatgatgaagaat
gttgacaacccaatcatcattgatcagaactactgccccaacaatcaaggttgtcctaat
caggcttctggcataaagatcaatcaagtgacatacaagaacatatttggaacatcatca
acacaagtagcaatgagttttgaatgcagtccaagcaatccatgtagtggaatcaagtta
caagacataaaacttacttatttgaacaacaaaaaggctcaatctatttgcaagaacatt
agaggaactactggaggagtcatcttgcctgataattgtttattataa
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