Solanum dulcamara (climbing nightshade): 129891145
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Entry
129891145 CDS
T09577
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129891145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129891145
03036 Chromosome and associated proteins [BR:
sdul03036
]
129891145
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129891145
Coactivators
SAGA/TFTC/STAGA complex
129891145
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129891145
STAGA complex
129891145
TFTC complex
129891145
SAGA complex
129891145
SLIK complex
129891145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
TAF4
CEP76_N
Motif
Other DBs
NCBI-GeneID:
129891145
NCBI-ProteinID:
XP_055822391
LinkDB
All DBs
Position
6:complement(876052..880876)
Genome browser
AA seq
546 aa
AA seq
DB search
MSTVPEEAIEVISQSIGISNISPDVLPALAADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDSALTLRNVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDVEFKDVIETPLPKAPLDTAL
FAHWLAIEGIQPAIPENPPLEALVLPPDNKKSEYKEDGVPVDLKVPVKHVLSRELQLYYD
KITELTVNRSNSPLFKEALASLATDPGLHPLVPYFTYFVADEVARNLNNFDLLFALMRLV
WSLLQNSHLHIEPYLHQSMPSVMTCLVAKRLGNKFSDNHWELRDFTAKLIALICRRYGHV
YHSLQPRVTKTLLHAYLDPAKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLRLLEPEM
QFEKQKNEVKRYEAWRVYGALMCSAGLCMYEHFKMLPASLSPSNWTFLKSKLKVLTTLSN
KRKTSMDNMISEPPTKKLVTDGPTPMLSDSLPVDIQGATGGQATILGVTDEDLSSKPQDL
QNKNVTNVTRTSRREITDGQSQNAPAAPGQAWKKDMDAANLLPPLFEYFGESMLFFAPSP
ELSIFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgccggaggaggcaatcgaagtgatatcacagagcatcggaataagcaat
atatcaccggatgttttaccagctctcgccgccgatgtcgagtaccgtattcgggaaatt
atgcaggaagctataaaatgtatgcgtcattcgaagagaactactttatctactgatgat
gttgattctgcactcaccttgagaaatgtggagccaatatatggttttgcttcgggagat
cccttacggttcaggagagctgccgggcataaggatttgttctatattgaagagaaggat
gtagaattcaaagatgtgattgaaacgcctctgccgaaagctccactagatactgctctt
tttgctcactggttagctatagaagggatacagcctgctattcctgaaaaccctccgctt
gaagcacttgtcctacctcctgataataaaaagtcagagtataaggaggatggagttcct
gttgatcttaaagtacctgttaagcatgtcttatcccgtgagcttcagctttattatgac
aagattacagagcttaccgtgaatagatccaactcccctctcttcaaagaagctttagca
agcttagcaacagaccctgggctccatcctttagttccttacttcacatattttgttgct
gatgaggttgcacggaatttgaataattttgatctcctttttgctttgatgaggctggtc
tggagccttcttcagaattctcatttacatattgaaccatatttgcaccagtcgatgccg
tctgtaatgacatgccttgttgcgaaaaggctggggaataaattctctgacaaccattgg
gaactaagggacttcacagcaaagttaattgctttaatatgcaggcgatatggtcatgtc
tatcacagtctccagccacgtgtcacaaagactttgctgcatgcttatcttgatccagct
aaggcactgccacagcattatggggcaattcaagggctagcagctcttggacctggtgtg
gttcgcctgcttgtgctgccaaatcttgaagcttatttgcgattgttggagccagaaatg
cagtttgagaaacaaaaaaatgaagtgaagagatatgaagcttggcgtgtgtatggggcc
ttaatgtgctctgcgggtctatgcatgtatgagcatttcaagatgcttcctgcatctcta
tctccatcaaattggacattcctgaagagtaaattgaaagtcttgactacattgtcgaac
aaacgcaaaacgagcatggacaacatgatctcagagccgccaaccaaaaaattagtgaca
gatggtcccacaccaatgctatcagattctttgccagtagacatacaaggagctactggt
ggacaggccacaatattgggtgttacagatgaggatttatcgtcaaagccacaagatttg
caaaataagaatgtgaccaatgtgacgagaaccagcagaagggagattaccgatgggcaa
agccaaaacgcaccagctgctcctggtcaggcctggaagaaggatatggatgctgcaaat
ttgttgccacctctatttgaatattttggtgaaagtatgttgttctttgcaccttcccct
gaattgtcaatctttttgtga
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