Solanum dulcamara (climbing nightshade): 129891149
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Entry
129891149 CDS
T09577
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129891149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129891149
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
129891149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
AAA_29
AAA
ABC_trans_N
AAA_25
AAA_22
AAA_18
RsgA_GTPase
AAA_30
AAA_23
AAA_33
NTPase_1
nSTAND3
Zeta_toxin
RuvB_N
AAA_28
AAA_5
NACHT
cobW
AAA_17
AAA_11
CCSMST1
SLFN-g3_helicase
DO-GTPase1
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
129891149
NCBI-ProteinID:
XP_055822397
LinkDB
All DBs
Position
1:complement(89316368..89323147)
Genome browser
AA seq
1435 aa
AA seq
DB search
MEPTNSRGSSLRERIIRGNSLRGSLSSMRNSTNNSRWTGNDGEIFNHSTRDEDDEEALKW
AALEKLPTFDRMRKGLLFGSQGASAEIDIHDIDFQERKKLLERLVKVADEDNEKLLLKLR
QRIDRVGIDLPEIEIRYEHLTIEADAYIGSSALPTFINFMTNFVEDLLNSLHILPNRKRK
LTILNDVSGIIKPCRMTLLLGPPGSGKTTLLLALAGKLDSALKVTGKVTYNGHEMNEFVP
QRTAAYISQYDLHIGEMTVRETLEFSARCQGVGSRYEMLVELLRREKAAKIKPDPDIDVF
MKALAAEGQEANFVTDYVLKLLGLDICADTMVGDEMIRGISGGQKKRVTTGEMLVGPSKA
LFMDEISTGLDSSTTYSIVNSLRQSVQILNGTVVISLLQPAPETYNLFEDIILLSDGKIV
YQGPREDVLGFFESMGFKCPDRKGVADFLQEVTSKKDQQQYWARRDETYRFITSKEFAEA
YQSFHVGRKLQDELSASYDKSKSHPAALSTQKYGIGKKQLLKVCTERELLLMKRNSFVYV
FKFTQLTVMALISMTLFFRTKMPRDTIEDGGKYAGALFYIVTTVMFNGMAEIVLIIYKLP
VFYKQRDLLFFPSWAYAIPSWIIKIPITFVEVGLWVFLTYYVFGFDPSPGRLFKQFLLLL
FVNQMASGLFRFIGAAGRTMGVANTFGTFSLLLQFALGGFVLSRDSMKKWWIWGYWCSPI
MYAMNSILVNEFDGKKWKQIAPIGTDSLGVAVLRSRGFFPNAYWYWIGVGALVGFTIVFN
ICFSLALAYLNPFGKPQAMISEGSDDAKTTSIENEVANSEGQNKKKGMVLPFEPHSLTFD
EVTYSVDMPQEMKYQGVTEDRLVLLNGVCGSFRPGVLTALMGVSGAGKTTLMDVLAGRKT
GGYIEGSIKISGYPKKQETFARISGYCEQNDIHSPYVTIYESLVYSAWLRLPSDVDEKIR
KMFVDEVMELVELTPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD
ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGKEIYVGPLGHHSCH
LINYFESIPGVSKIQDGYNPATWMLEVTNLAQEMMLGVDFTDLYKKSDLYRRNKTLISEL
SVPRPGTKDLHFDNQYSQPFWTQCMACLWKQHWSYWRNPAYTAVRYIFTVFIALAIGTMF
WDLGTKVGKSQNLFNALGSMYAPVLFLGFQNSSSVMPVVAVERTVYYRERAAGMYSSIPY
AFGQTFIEIPYVFVQAVTYGVVIYAMISFEWTVTKFFWYLFIMYFTLLYFTFYGMMTVAI
SPNQNVAQIVSVFGYSMWNLFSGFVVPRPAIPIWWRWYYWACPVSWTLYGLGASQFGDLQ
DKITDTDETAKQFLRRYFGFKHDFLGVVAVMTVAYAVVFALTFALAIKFFNFQKR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggagccaactaattcaagagggagtagtttgagagaaagaataattaggggaaatagt
ttaagagggagcttaagttcaatgaggaatagtactaataactctagatggactggcaat
gatggggagatttttaatcattcgacgagagacgaagatgatgaagaggctcttaaatgg
gcagctctagaaaaacttccaacgttcgatcgtatgagaaaaggtctcttgtttggatca
caaggtgcatctgctgaaattgatatacatgatattgattttcaagaaagaaaaaagttg
cttgaaaggcttgtgaaagttgcagatgaggataatgagaagctcttgttgaaactcaga
caaagaattgacagagttgggatagatttgccagaaatagaaataagatatgagcattta
actattgaggcagatgcatatataggaagtagtgctttgcctacatttatcaactttatg
actaattttgttgaggatttgttgaactctctccatatcctaccgaatcgaaagagaaaa
ctcactattcttaatgatgtgagtggtatcattaagccttgcagaatgactttgctttta
ggacctccaggttctgggaaaactacattattattagctttggccggaaagcttgactct
gcccttaaggttactggaaaagtgacctataatggacatgaaatgaatgaatttgtgcca
caaagaacagctgcttatattagccagtatgatttacacattggagaaatgactgtgaga
gaaaccttggaattctctgccagatgccagggagttggctcgcgttatgagatgttggtt
gaactgttaagaagagagaaagcagcaaaaatcaagccagatcctgatattgatgtcttc
atgaaggcattagcagcagagggacaagaagccaattttgttacagattatgttctgaag
cttttggggctagatatttgtgcagatactatggtgggagatgaaatgataaggggtatt
tcaggaggacaaaagaagcgcgtgacaactggtgaaatgctcgttggaccgtcgaaggca
cttttcatggatgaaatctcaactggattggatagttccactacttactcaatagtgaac
tctctaagacaatctgtgcaaatcttgaacggaactgttgtgatatctctcttgcagcca
gcacccgagacatacaacttgtttgaagacattattctgttatcagatgggaaaattgtc
tatcagggtcctcgagaggatgtccttggtttctttgagtccatgggtttcaaatgtcct
gatagaaaaggcgtggccgacttcttgcaagaagtgacttcaaagaaagatcaacaacaa
tattgggcgaggagggatgaaacttaccgatttatcacgtcaaaagaatttgctgaggca
tatcaatcgttccatgttgggaggaaactccaggatgagctttcagcttcatatgacaag
agcaaaagccatcctgctgctttgtcaactcaaaagtatggtatagggaagaaacaactc
ttaaaggtctgcactgaacgagaactcttattaatgaagaggaactcatttgtttacgtc
ttcaagttcactcagcttacagttatggcactcatatcaatgaccctcttcttccgaact
aagatgccccgtgatactattgaagatggaggaaaatatgctggtgccctcttttatatt
gtcactacggttatgtttaacggaatggctgagatcgtcctgataatttacaaacttcct
gtcttttacaagcaaagggaccttctatttttcccttcatgggcttatgcaattccctca
tggataatcaaaatccctataacatttgttgaagttggactttgggtgttcctcacttac
tatgtctttggatttgatccgagccctggtagattgttcaaacaattcttgctactctta
tttgtaaaccagatggcatcaggattgttccgcttcattggggccgctggaaggaccatg
ggagttgctaatacatttggaacattttctctgcttttacagtttgcattgggtggattc
gttctttcacgagatagtatgaagaaatggtggatatggggttactggtgttcaccgatt
atgtatgctatgaattcaattcttgtgaatgaatttgatgggaaaaagtggaaacaaatt
gcaccaattggaactgattcacttggagttgcagttctaagatctcgagggttcttccca
aatgcatactggtattggataggtgtcggtgcacttgttggattcacaatcgtctttaac
atctgcttcagtcttgcactcgcttatctcaacccatttggtaagccgcaagctatgata
tcagaaggcagtgatgatgccaaaacaacgagcattgagaatgaagtggcgaatagtgag
ggccagaataagaaaaagggaatggttcttccatttgaaccgcattccctcaccttcgat
gaagttacatattctgttgacatgcctcaggaaatgaaatatcaaggtgtcactgaagat
agattggtacttctgaatggtgtatgcggatctttcaggcccggtgttttgacagctttg
atgggagttagtggcgctggaaaaacaacgttgatggatgtattggccggacgaaaaaca
ggaggatatattgagggtagtatcaagatctctggctatccgaagaagcaagaaacattt
gcacgtatatctggatactgtgagcagaatgatatccattcaccttatgttacaatttat
gagtcattagtatactcagcttggttgcgtttaccttctgatgttgatgaaaagatcaga
aagatgtttgttgatgaagttatggaacttgtggagcttacaccattaagatcagccttg
gttggtctgccaggagtcaacggtctctcaaccgagcaacgcaaaaggttgaccattgca
gtggaactagtggcaaacccctcaatcattttcatggatgaaccaacttcggggctggat
gcaagagctgctgcaattgtgatgagaactgttaggaacacagttgacacaggaagaacc
gttgtttgtaccatccatcagcctagtatcgacatttttgaagcctttgatgagctattt
ctaatgaaacgaggagggaaagagatatatgtcggtccattgggtcaccattcttgccat
ttgatcaattactttgagtcaattcctggggtaagtaaaatacaagatggctacaatcca
gcaacttggatgttggaagtcacaaacttggctcaggaaatgatgttgggggttgatttt
actgatttatacaagaaatcagacctttataggaggaataaaacattgattagtgaactt
agcgtgcctcgccctggtacaaaagacctacattttgacaatcaatactcacaaccattt
tggacccaatgtatggcttgcctttggaagcaacattggtcatactggcgtaatcctgct
tataccgcagtcagatatatcttcacagtcttcatcgccttggccattgggacaatgttc
tgggatcttggtactaaagtgggtaagagccaaaacctatttaacgctctcggatcaatg
tatgctcctgttctcttccttggctttcaaaattcgtcatcagtgatgcctgttgtagcc
gttgagcgtacagtatattacagagaaagagctgcaggaatgtattcttccatcccctat
gcctttggacaaactttcattgaaataccgtatgtctttgtgcaagctgttacctatggt
gttgtcatctatgctatgatctcatttgaatggacagtgaccaagttcttttggtacttg
ttcatcatgtatttcactctcttgtacttcaccttctatggtatgatgactgttgccatt
agcccaaatcaaaatgtcgcgcaaatcgtctctgtctttggctattcaatgtggaatctt
ttctcaggattcgttgttccacgacctgctatccccatatggtggagatggtactattgg
gcttgtcctgtttcctggacattgtatggtttgggtgcatcgcaatttggagacctccaa
gacaaaattactgatactgatgaaacagccaaacaattcttgaggcgttacttcgggttc
aagcatgattttcttggagtagttgcagttatgactgttgcatacgctgttgtttttgcc
ctcacatttgctttggctattaagtttttcaacttccagaaaagatag
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