Solanum dulcamara (climbing nightshade): 129891240
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Entry
129891240 CDS
T09577
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Module
sdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129891240
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
129891240
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
129891240
NCBI-ProteinID:
XP_055822506
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All DBs
Position
6:61495214..61499594
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AA seq
457 aa
AA seq
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MLRFSTNLLKLVILLVLVIYCTLESAPCNARYRRERKQEPQQPSFEKFYVFNVLDYGAKG
DGVTYDTKAFEATWIEACKVEGSTMMVPSGYDFLVGPISFSGSHCEKNIVFQLDGRIIAP
INPKVWGPVLQWLEFSKLNGICVKGKGIIDGQGSVWWKNAPLLIEEYQGDDSEVQDDYAQ
TIALISSTSKGKMPRTRPAALRFSGSSNVVVTGITIQNSPKAHLKFNDCVAVQVSGITVS
SPGDSPNTDGIHLQNSQNVVISSSDIACGDDCISIQTGSSAVFIHDVNCGPGHGFSIGGL
GNDNTKACVSNITIKDSTLQNTMTGVRIKTWQGGSGSVQGIMFSNIHVSDVETPIMIDQF
YCDKRRCGNHTSAVAISRVSYQSIKGTYSYKPVHFACSDSVPCTGVSLADIELTPSTKKQ
HFYGPYCWETYGELRTKTTPPIDCIQPDKRIPSYDSC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtttagtacaaatctcttgaagttagttattttgctggttttagtaatctat
tgtactttggagagtgcaccatgcaatgctaggtatagaagggaaagaaaacaagaacct
caacaaccaagttttgaaaagttttatgtcttcaatgtattagattatggtgctaaaggt
gatggagtcacatatgacaccaaagcatttgaagcaacatggatagaagcttgtaaagtt
gaaggatcaaccatgatggttccatcaggctatgatttcctagttggtcctatctctttt
tcaggatcacattgtgaaaaaaacattgttttccagttggatgggagaattatagcccca
ataaaccctaaagtgtggggtcctgtattacaatggcttgaattctcaaagctaaatgga
atatgtgttaagggaaaaggcattattgatggtcaaggatcagtgtggtggaaaaatgct
cctttattaatagaagaatatcaaggtgatgattcagaggtgcaagatgactatgctcaa
acaattgctttgataagtagcacatcaaaaggaaaaatgcccagaaccagaccagcagca
ctgaggttttctggaagttccaatgtagttgtaacaggcataacaatccaaaacagtccc
aaagcacatctcaagtttaatgattgtgtggctgttcaagtttctgggatcacagtttca
tcccctggagatagcccaaatactgatggaattcaccttcaaaactcccaaaatgttgtt
attagcagcagtgacattgcttgtggagatgactgtatatctatacaaacgggaagttca
gctgtgttcattcacgatgtgaattgtggacctggacatggattcagcataggaggacta
ggaaacgacaacacaaaagcctgcgtctccaacataacaattaaggattcaacactacaa
aacactatgactggtgtaagaatcaaaacatggcagggaggctcagggtcagttcaggga
atcatgttctcaaatatccatgtttcagatgtggaaacaccaataatgatagatcaattc
tattgtgacaaaagaagatgtggtaaccacacatcagcagtagcaatatcaagagtttca
tatcaatccataaaaggaacttattcatataaaccagttcattttgcatgtagtgactct
gtcccatgcacaggtgtttcccttgcagacatagagcttacaccttcaaccaaaaagcag
cacttttatggaccttattgttgggaaacttatggagaattgagaacaaaaacaacccct
cctattgattgtattcaacctgataaaagaatccctagttatgattcttgttga
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