Solanum dulcamara (climbing nightshade): 129891244
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Entry
129891244 CDS
T09577
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00510
N-Glycan biosynthesis
sdul00513
Various types of N-glycan biosynthesis
sdul01100
Metabolic pathways
sdul04141
Protein processing in endoplasmic reticulum
Module
sdul_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
129891244
00513 Various types of N-glycan biosynthesis
129891244
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129891244
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
129891244
NCBI-ProteinID:
XP_055822512
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Position
6:61887629..61903236
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AA seq
689 aa
AA seq
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MGKLLGILILALCTLICEAAIFRPISDSHRSAALELLKAKDGSFTSLKDTYEALRTFKVL
GIGQQPDIKAKTCKSVVDTVRSPSSTLKDLYLALEVNVLLKCELNKETFAGIASRLKDSV
NTASSLLDYYYSIGSLVLIKGQTSEVDVHLGGADSVFRAIKALSQSDGRWRYSSNNPKSS
TFAAGIALESLAGVISLASSEIDHSLISLVKNDISKLLDGVEKYDDGAYYFDEKLVDAHG
HQSPLSASSAVIRGITAFATASDEDLNLPGDKILGLARFFLGVGIPGNAEDLFYQLDALA
SLENNRVSIPLILSLPTAVLSLTRKDQLKVNVNTVLGSAAPSLSVKLKQIFSYGSKDASI
IDQDLKFDPENAVHFLDALPGNIDVGSYIFSLEIVLHNPEDKKIYATGGRTKVPIYVTGF
IEVDHEDVAVLDSDLGNVETQKRFDLAGENTLSLSANHLQKLRLSFQLTSPLGNAFKPHQ
AFLKLRHESKVEHIFVVENSGKFFEIILDFLGLVEKFFYLSGRYDIQLAVGDAVMENSFF
LQLGSIELDLPEPPEKAARPPPQPIDSTSRFGPKAEISHIFRAPEKRPPKELSLIFLALV
LLPFIGFLVGLWRLQVNLKNFPKASAPAIFAILFHLGIAAVLTLYLLFWLKLNLFTTLKA
LGFLGIFLMFVGHRTLAYLASSSAKLKSA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacttttaggaattttgattctagcgttgtgtacattgatctgtgaagctgca
attttcagacccatttcagattctcaccgatctgctgcgttagagttgcttaaagccaaa
gatggatcttttacaagccttaaagacacatacgaggccttaaggacatttaaggttctt
gggattggacaacagcctgacatcaaggcgaagacatgtaaatcagtggtggataccgtt
cggtctccatcttccacattgaaggatttgtacctagcattggaagtaaatgtgctattg
aaatgcgagcttaataaggagacttttgctggcatagcttcaagacttaaggattctgtg
aacactgccagctcgcttctcgactactactattcaattggtagtttagttcttatcaag
ggccagacctctgaagttgatgtacatcttggaggtgctgattcagttttccgtgccata
aaggctcttagccaaagtgatggaagatggcgctatagctccaataatcccaagtctagt
acatttgctgcaggaattgcacttgagagtctggctggtgtcatttcattagcatcttct
gagattgatcattctctgattagcctggtgaaaaatgacatatcaaagctcctagatggt
gttgagaaatatgatgatggtgcctattactttgatgaaaagcttgttgatgctcatgga
catcagagtcccctatcagcttcatcagcagtgatacgtggtatcacagcatttgccaca
gcatctgatgaagatttaaatctaccaggtgacaaaattttaggtttagcaaggtttttc
ctcggtgttggaattcctggaaatgcagaagacttgttttatcaacttgatgcattggct
tccttagaaaacaatcgggtctccattccattgattttgtcgctcccaactgctgtgctt
tcattgactaggaaagaccagcttaaggtgaatgtgaacactgttttgggctctgctgca
ccttctctgtctgtgaaactcaagcagatcttcagctatggttcaaaggatgcttcaatc
attgatcaggatctcaaatttgaccctgaaaatgctgtgcatttcttggatgcattgcca
ggaaacattgatgttggcagttacattttttctttggagattgtccttcacaatccagag
gataaaaagatctatgccactggaggacgaacgaaagtacccatatatgtgacgggattt
atcgaagttgaccatgaagatgttgctgttctcgacagtgatcttggtaatgtggaaact
caaaagagatttgatttggcaggggagaacacactctctctctcagcaaatcatcttcaa
aagctacgattgtcattccaattaacttctcctcttgggaatgcttttaagcctcaccag
gctttcctcaagttgagacatgagagcaaagtggaacacatctttgtggtggaaaattct
gggaaattttttgaaataatactagattttcttggactagttgagaagtttttctatcta
tcaggtagatatgacatccaacttgcagttggggatgctgtcatggaaaactcgttcttc
ctacaactgggttcgattgaattagatctgccagagcctccagaaaaggcagctcgccct
cctccacaacctattgattctacctcaagatttgggcccaaggcagaaatatctcacata
ttcagagctccagagaaaagacctcctaaggagctttctctcatctttctggcccttgtt
ctcttgccattcattggatttttggtggggctttggaggctgcaagtgaacctgaagaac
ttcccaaaagcatcagcacctgctatatttgccattcttttccaccttggcatagcagct
gtcttaacactctatcttctattttggttaaagctgaatctattcacaacactcaaggcg
cttggatttttggggatcttcttgatgttcgttggacacagaactcttgcatatctagca
tcatcatctgccaagttgaaatcagcctaa
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