Solanum dulcamara (climbing nightshade): 129891280
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Entry
129891280 CDS
T09577
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129891280
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
129891280
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_12
TPR_1
TPR_2
bL31_N
Motif
Other DBs
NCBI-GeneID:
129891280
NCBI-ProteinID:
XP_055822558
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Position
6:complement(2210208..2225691)
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AA seq
1254 aa
AA seq
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MANFLAQFQSIKTTCDHVVIAVEDVSDLWPLVKKGFEDHLPFKRAFLNNKTRNPVLVDEL
PAEYILTTDSRLRSRYPQEQSLFWFREPYATVVLVSCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAASHNDQSTKMAKKVYAKLEVDFSSKKRERCCKLDIHGPDTNFWDDLEAKI
MECIRNTLDRRIQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEIAHLHEDALREY
DELELCYLETVNMTGKQRDFGGMDSGDDQAALLNPGKKALNQIVQDDSFREFDFRQYLFA
CQSKLLFKLTRPFEVASRGHSFIISFSKALALHESKLPFCTREVWVITASLALITATASQ
YKDGQVAPDIEKEFYRVQGDLYSLCRTKFMRLAYLIGYGLHIERSPVNSASLSMLPWPKP
GVWPSLPPDASSDVLVKEKMMFEESLRVKHFGIQRKPLPLEPSVLLREANRRRASISAGN
VFEMFDGHPNAIDGSGSMSSPAKAQSISMLRTNSSPGNFESSISRPLRLSEICVAAEHAL
RSTISDAELWKSLSSVQEFEQKYLELSKGAANNYHRSWWKRHGVVLDGEIAAVFHKNGNY
DLAAKLYEKVCALYAGEGWQNLLAEVLPNLAECQKELGDQAGYLSSCVRLLSLDKGLFSS
KERQAFQSEVVRLAHSEMENTVPLDVSSLITFSGNPGPPLQLCDGDPGTLSVIVWSGFPD
DITLESLSLTLTATTNTDEGVKAIKRSGETILKPGRNTIMINLPPQRPGSYVLGVLTGKI
GLLSFRSHSFSKGAPADSDDFMSYEKPTRPILKVFKPRSLVDLTAAVSSALLMNEPQWVG
IIVKPISYSLKGAILHIDTGPGLAIEKSHNIEIERHVNGHTDELDHSGDSKDDDSPAATP
EVKQMSLHDGNIELPDWASNITSVLWIPVRATSDELPKGAPAGAILPQRHNLVEGLRTIA
LKLEFGVSRNQIFERTIAVHFTDPFSVSTRVTDKSTDGKLLLQVILQSQVQATLTIYDSW
LDLQEGFAHIRNGDKKPISGFFPLVISPKSRAGILFSVCLANAPIKEEAEIQCPESILNI
RFGILGNRAAGAHDPNAEEPSGHDGSTQSLIFKSSLLLQRPVLDPCFAVGFLPLSSTDLQ
VGQLVSMRWRVERLRSSEEYAASENNDDVLYEVHANSDHWMIAGRKRGHVLLSTKQGSRI
TISVLCLPLVAGYVRPPQLGLPNVDKANICCNPPSPHLVCVFPPALSSSFCIPA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttcttagctcagtttcaaagtattaaaactacttgcgatcacgtcgtcatt
gccgttgaagatgtcagtgatttatggccccttgtaaagaaggggtttgaagaccatttg
ccattcaagagagcttttctaaataacaagacccgtaatcctgtgcttgtggatgaactg
ccagctgaatacatattgacaacagattcaagacttcgtagtcgatatcctcaagaacaa
tcattattttggttccgagagccatatgccactgtagttcttgtctcttgtgaggatctt
gatgagtttaagactattctcaagccacgcctaaagttaatagttcaaaatgatgaacgg
gagtggttcatcgtgttcgtgtctaaagcagcatctcacaatgatcagtccaccaagatg
gcaaaaaaagtatatgctaaacttgaagttgattttagctccaagaaaagagaaagatgt
tgcaaactagacattcatggacctgatacaaatttctgggatgacttggaagccaagatc
atggaatgcatcagaaatacacttgataggcgcattcagttttatgaagaggaaatacgg
aagcttagtgaacagcgcttcatgcctgtgtggaacttctgtaacttcttcattttgaag
gagagtctggcttttatgtttgagattgctcatctccatgaagatgcattacgtgaatat
gacgagctagaactctgctacttggaaacagtgaatatgactgggaaacagagggacttt
ggaggaatggacagcggcgatgatcaggctgcattgctcaacccaggaaaaaaagcactt
aaccagattgttcaagatgattcttttagggaatttgacttcaggcagtatctatttgcc
tgccaatcaaagcttctctttaagctgacccgaccatttgaagtagcatcaagggggcat
tcatttattattagcttctcaaaggcattggcccttcatgagagtaaattgcccttctgc
acgcgtgaagtatgggttataaccgcttccttggctttaatcactgcaactgcttctcaa
tacaaagatggacaagtggctcccgacattgaaaaagagttttaccgtgttcagggggac
ctttattctttgtgtcgtactaagttcatgcggctggcatatttaattggttatggatta
catattgaaagaagtcctgtgaatagtgcttcacttagcatgctgccttggcctaagcca
ggagtttggccttctcttcctcccgatgcttcatctgatgtgcttgtgaaagaaaagatg
atgtttgaagaaagtctgcgggttaagcattttggtattcagaggaagcctttgcctcta
gaaccgtctgtactcttgcgggaagcaaatcgcagaagagcttctatttctgctggaaat
gtgtttgaaatgtttgatggacatccaaatgcaattgatggctcaggttcaatgtcttca
ccagcaaaagcacagtcgatatcaatgttgagaactaactcttcgcctggaaactttgag
agctcaatcagccgacctttgaggctttcagaaatttgtgtagctgctgagcatgctttg
cggagtacaatttctgatgcagaactgtggaaatcattgtcttctgtccaggaatttgag
caaaaatacctggagctgtcaaaaggagctgccaacaactatcatcgttcatggtggaag
aggcatggagttgtacttgatggtgaaattgcagctgtgttccataaaaacggaaattat
gatcttgctgcaaaattgtatgaaaaggtttgtgctctttatgctggtgaaggatggcag
aatcttttagctgaggtccttcccaatttagctgagtgccaaaaggaacttggtgatcaa
gctggctatctatcttcatgtgtaagattgctctcattggataaaggattgttctccagc
aaggaacgtcaagcatttcagtctgaagtggttcgtcttgctcatagtgagatggagaac
accgtgcctctagatgtgtcctcactgataacattttctggcaatcctggaccaccactg
cagctttgtgatggcgatcctggtacactctctgtcattgtatggagtggatttcctgat
gacattactctagaatcacttagtctaactctcacagccacaactaataccgatgagggt
gttaaggcaataaaaagatccggtgaaacgatattaaagcccggaaggaatacaatcatg
atcaatttacctcctcagagacccggttcttatgttttgggggttcttacagggaaaatt
ggtctactaagttttagatctcacagcttttcaaagggtgctcctgcagatagtgatgat
tttatgagttatgagaagccaacaaggccaatcttaaaggtgttcaagccaaggtctctg
gttgatcttactgctgctgtttcatctgctttattgatgaatgaacctcagtgggttgga
ataattgtgaagccaattagttactctcttaagggtgcaattctgcacatagacactggt
cctgggttggctattgaaaaatcgcataatattgaaattgagaggcacgtgaatgggcac
acagatgagttagaccattctggagattctaaagatgatgacagtcctgcagctactccc
gaagtaaaacaaatgtctcttcatgatggaaatattgagctgcctgattgggcaagcaac
ataacttctgttttgtggattcctgtgcgagctaccagcgatgaacttcctaaaggcgct
cctgcaggtgcaattcttccccagagacacaacctagtggagggactgagaacaatagct
ttgaaacttgaatttggggtgtcgcggaaccaaatatttgaaaggacaattgctgtgcac
ttcactgaccccttctctgtaagtacacgagttacggacaaaagcactgatggtaaattg
cttttgcaggtgatactacaatcacaagtccaagctacactgaccatctatgattcttgg
cttgatcttcaagaaggctttgctcacattagaaatggtgataaaaaaccaatctctggc
ttcttccccttagtgatctctccgaaatctagagctggaattctcttcagtgtatgtctg
gcaaatgcaccaataaaagaagaagctgagatccagtgtcctgagagcattttaaatatt
agatttggtattttgggaaatagagctgctggtgcccatgaccccaatgctgaggaacct
agtggacatgatggatcgactcagagtctgattttcaagagctctcttcttttacagaga
cctgtgcttgacccttgctttgcagttggttttctgcctctttcttcaactgatcttcaa
gtaggacagcttgttagcatgagatggagagttgaaaggttaaggagttcggaggaatat
gcagcttctgaaaacaatgatgatgttctatacgaggtccatgcaaattcagatcactgg
atgattgctgggaggaaaaggggacatgtcttactctcaacgaaacaaggatcgagaata
actatttcagtattatgcttgccactggttgctggatatgttcgtcctcctcagttgggg
ttgccaaatgttgacaaggccaatatttgttgtaatcctcccagtccacatttggtgtgc
gtcttccctccagctttgagttcttctttctgcataccagcctga
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