Solanum dulcamara (climbing nightshade): 129891300
Help
Entry
129891300 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129891300 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129891300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129891300
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129891300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
Zn_ribbon_RanBP
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
Vps36-NZF-N
GTP_EFTU_D4
DZR
G-alpha
Motif
Other DBs
NCBI-GeneID:
129891300
NCBI-ProteinID:
XP_055822612
LinkDB
All DBs
Position
1:63925706..63940623
Genome browser
AA seq
670 aa
AA seq
DB search
MQAHVYLLGISESITMPRKVNYGVDYEEDFYDYEDYNYDYDDGYEYLETNGSAPETNTNQ
ELVKVGIWHCSICTFDNRASMNVCDVCGNPKQEPVKAGFWCCPICTFDNEDTTNLCDMCG
VLRNPLIKGCGGVKASPATSDKVVQSDVLSSKKEITGEVKRELVFEGPTSSSTSTAKVRR
GDMKDRGSFIETRGNHGVMSNVSNMSVSSKPRNTESRIASRSQSKPQKIVCTDQLEDKLN
QLNLAIVGHVDSGKSTLSGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEE
RERGITMTVAVAYFNTKSYCVVLLDSPGHRDFVPNMISGATQADAAILVVDASIGAFEAG
IDVSGGQTREHAQLIKSFGVDQIIIAINKMDAVGYSKERFDTIKNKLGTFLRSCKFKDSS
VLWIPLSAMENQNLVTSPSDARLLSWFQGPCLLDAIDSLQPPQRDYSKPILMPICDLVKL
PSQGQVSVCGKLETGALQTGDKVLVMPSREMATVRSLEHNSQVCDSAKAGDNVTINLQGI
DVNRVMAGDVLCHPEYPIAVTNHLELKILLLDIAVPILIGSQLEFHVHHAKEAARVVKIL
SLLDPKTGKETKKSPRCLLAKQNAIIQVVLQGMVCIEEHSKCKGLGRVSLRASGRTIALG
LVTRVLEKKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcatgtttatttattaggcatatctgaaagcatcaccatgcctcgtaaggta
aattatggagttgattatgaggaagacttttatgactatgaagattacaattatgactat
gacgatggatatgaatatttagagacaaatggtagcgcaccagaaacaaatacaaaccag
gaattggtcaaggttggcatctggcattgttccatttgcacatttgataacagagctagt
atgaatgtatgtgatgtatgtggaaatccgaaacaggaaccagttaaggctgggttttgg
tgttgtcccatttgcacatttgataatgaagataccacaaatttatgtgatatgtgtggg
gtcctgcgtaacccattgatcaaaggttgtggtggtgtcaaagctagcccagctactagc
gacaaagtcgtacagtcagatgtcctttcaagtaaaaaggaaataactggtgaagttaaa
agagaattggtttttgaagggcctactagctcttccacatctacggcaaaggttagacgt
ggtgatatgaaggatagaggttcttttatagaaactagaggaaatcatggcgtcatgagt
aacgtgagcaatatgtctgtatcatcaaagcctcgcaatacggagagtagaattgcttca
agatcacagagtaaacctcagaaaattgtatgcactgatcaattagaagacaaattgaac
cagctaaatcttgcaattgttggccatgttgattctgggaagtcaacactatcaggaaga
ctactacaccttttggggcagatatctcagaaggaaatgcacaaatatgaaaaagaggcc
aagcagcaaggaaaagggtcctttgcttatgcctgggcattggatgagagtgctgaggaa
agagagaggggaataactatgacagtggctgttgcctactttaacacaaaaagttactgt
gttgtactgcttgattccccaggccatagagactttgtcccaaatatgatatcaggtgca
acacaagcagatgctgcaattctcgtagttgatgcttcaataggtgcatttgaagctggc
attgatgttagtggaggtcaaacaagggagcatgcacaacttatcaaaagctttggggtg
gatcagataataattgctattaacaaaatggatgcagtgggatactccaaagaacgtttt
gatacaattaagaataaactaggaacatttcttcgttcttgtaagtttaaagattcatca
gtgttgtggattcccctgagtgccatggaaaaccaaaatttggtgacaagtccttctgat
gcaagattgttgtcctggtttcaaggcccttgccttttagacgccatagactctctccaa
cctccccaaagagattactcaaagcctatattaatgccgatatgtgatcttgttaaatta
ccctcacaaggacaggtgtcagtatgtgggaagttggagacgggagctcttcaaactgga
gataaggttctagttatgccatcaagagaaatggcaacagtgcgttctttggaacataat
tctcaggtttgtgacagtgcaaaagctggagacaatgtcactattaatctacaaggtata
gatgtgaatcgtgtaatggcaggggatgtgctgtgccaccctgaatatcctattgctgtt
acaaatcatttggaactgaagattcttctcctggatattgctgttccaattttgattggc
tctcagttggaatttcatgtacaccatgctaaggaggctgcaagggttgtgaagattttg
tcgttgcttgatccaaagactggaaaggagaccaagaaatcacctagatgtcttctagca
aagcagaatgctataattcaggtagttttgcaaggaatggtttgtattgaagaacattct
aaatgtaagggtcttggaagggtgtccctcagggcatcaggaagaaccatcgctcttggt
cttgtgacacgagttctagagaagaaggaatag
DBGET
integrated database retrieval system
