Solanum dulcamara (climbing nightshade): 129891401
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Entry
129891401 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129891401 isoform X1
KO
K20168
TBC1 domain family member 15
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129891401
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129891401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
129891401
NCBI-ProteinID:
XP_055822724
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All DBs
Position
6:complement(72221745..72237267)
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AA seq
678 aa
AA seq
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MHELDLHDFSDDAYYAASMQQGSASMTRSGNGNQNSSSEQISAEIVYLKDDVAIRPTQHA
WERIRGRLKLIKHGDSLLMTWIPYDGQSSSARLSEKDKSLYTIRAVPFSDIRSIRRHTPT
FGCQYAITVLSSGLAFPPLYFYNGGLKEFLATIKQHFFLVRSAEDANIFLVNDLQNPLQR
SLSSLEFPRAVSVANSPTSSVAPSESSFSPTDGEALDKNSAYIQQNGRQRQKHNDPRHLS
IQVLEKFSLVTRFAREAKSQFLREAHGDGFISNAMRKHDKKPNNYSFVVESNDVHKPLED
VHVPADSLEESSCEKHSKNEEAALRDENFEYDYDKLSLVWGKPRQPPLGSKEWSTFLDSE
GRVIDSEALRKRIFYGGVEKGLRKEVWRFLLGYHSYDSTYAERKYLASIRKSEYETIKNQ
WKSITKEQAKRFIKFRERKALIEKDVVRTDRSIPFYDGDDNSNVKCLCDILLTYSFYNFD
LGYCQGMSDLLSPILYVMKDEPESFWCFVALMERLGPNFNRDQNGVHSQLFALSKLVELL
DNPLHNYFKQNDCLNYFFCFRWVLIQLKREFDFEKTMRLWEVLWTHYLSQHLHLYVCVAI
LRRHRSKIIGEEMDFDTLLKFINELSGHINLDATLRDAEALCICAGENGEACILPGTPPS
LPFEITSMYNQQDDDDIL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaacttgaccttcacgatttctccgacgacgcctattacgctgcttctatgcaa
caaggttctgcgagtatgactagaagtggtaatggtaatcagaattcatccagtgaacaa
atcagtgctgaaatagtgtatttgaaagatgatgtggcgatacgcccgactcagcatgca
tgggagaggatcagaggtcggctgaagctgatcaagcatggagattctctgttaatgact
tggattccatatgatgggcaaagctcaagtgcgaggctgtctgaaaaagataaaagtctc
tatacaataagagcagtgcctttctcggatattaggtcaatccgtagacacactcctact
ttcggttgccagtatgctattacagtattgtcgtcaggactagcatttcctccactttat
ttttacaatggaggtctcaaggagtttctagcaacaattaagcaacatttttttctcgtg
aggtcagctgaagatgcaaatatatttcttgtcaatgacttacaaaatccactccagaga
agtctctcttccttggagtttcccagggccgtttctgttgccaacagtccaacttcatct
gttgcacctagtgaatcttcattcagtccgaccgatggtgaagcccttgataagaactcc
gcatatattcaacaaaatggcaggcaaagacaaaaacataatgatcctcgacatttatct
attcaagtactggagaaattttctcttgtcaccagatttgcacgtgaagcaaaatctcaa
tttcttcgtgaagctcatggtgatggtttcatatctaatgcaatgaggaagcatgacaaa
aaaccgaataattactcttttgttgttgaatctaatgatgttcacaagccgcttgaagat
gttcatgtgcctgcagattcattggaggaaagttcttgtgagaaacatagtaagaatgaa
gaagctgcattgcgtgatgaaaattttgagtatgactatgacaaattatcactagtatgg
ggaaaaccgcgccagcctccattgggatcaaaagagtggtccacctttttggactctgaa
ggtagggtcattgactcagaggcactaagaaagaggatcttttacggaggtgtggagaaa
ggtctgaggaaagaggtctggagatttctgttgggatatcattcgtatgattcaacttat
gccgagaggaaatatctcgcatctatcagaaagtcagagtatgaaacaataaagaaccag
tggaagagcatcactaaagagcaggctaaaagatttataaaattccgagaaaggaaagct
cttatcgaaaaagatgtggtcaggactgataggtcaattccattctatgatggggatgat
aattctaatgtgaagtgcttgtgtgacatactgctcacttactcattctacaactttgac
ctgggttactgtcagggtatgagtgatcttctttcaccaatattatatgtgatgaaagat
gaaccagaatcattttggtgctttgtggctttgatggagcgacttggaccaaattttaac
cgtgaccagaacggagtgcattctcagctttttgcattgtcaaagttggtggagttattg
gacaatcctttgcataattacttcaaacagaacgactgcttgaattatttcttctgcttt
cgctgggttcttatacaattgaaaagggaatttgactttgagaaaacaatgcggttgtgg
gaggtcttatggacgcattatttgagccagcatcttcatctgtatgtctgtgttgcaatt
ctgagaagacaccgcagtaaaataataggagaagagatggattttgacacactgctaaaa
tttatcaatgagctaagtggtcatattaacctggatgctaccctcagggatgctgaggct
ttgtgcatatgtgccggtgaaaatggagaagcctgcatccttcctggaactccaccttca
ttaccatttgaaattacttcaatgtacaatcaacaggatgatgatgatatactgtaa
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