Solanum dulcamara (climbing nightshade): 129891442
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Entry
129891442 CDS
T09577
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00531
Glycosaminoglycan degradation
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129891442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdul00536
]
129891442
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
129891442
Glycosaminoglycan binding proteins [BR:
sdul00536
]
Heparan sulfate / Heparin
Enzymes
129891442
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
129891442
NCBI-ProteinID:
XP_055822787
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Position
6:complement(73049497..73054878)
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AA seq
536 aa
AA seq
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MGSLFLQKGVLVWICLFSLRFICGTTAQDTVFIDGKIAIGRIDRHFICATLDWWPPEKCD
YGTCAWDHSSFLNLDLNNIIFLNAIKAFSPLKIRLGGTLQDKVIYQTEDHKQPCVSFVRN
TTEMFGFTPGCLPLSRWDELNAFFNKSGASIIFGLNALYGRSVHPDGLSVGAWDPSNAES
LIRYTVKKGYDIHGWELGNELSGSGVGTRVAADQYASDTISLYKIVQDAYKNFETKPLVL
APGGFFDEGWFKELVNKAGTSFDVATHHIYNLGPGRDEHLLEKILNPSYLDGEADTFSKL
QNILKTSESSVVAWIGEAGGAYNSGRNHVTNAFAFSFWYLDQLGMSAAYDTKTYCRQTLI
GGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSASFSGTKKIRAYAHCTKQSQGITLLL
INLDGNTTIHARVDFNGTMLHRRKHRHHHNHRKSSIKLPKSSKIASNTREEYHLTAKDGN
LQSQIMLLNGNALTVDSSGNIPTFEPIFVNSTEPITVAPFSIVFVHIPYVLLPACS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttatttttgcaaaagggagtgttggtgtggatttgtttgtttagtttgaga
tttatttgtggaacaacagctcaagacactgtgtttatagatgggaaaattgctattgga
agaatagataggcattttatttgtgctactttagattggtggccacctgagaagtgtgat
tatggaacttgtgcttgggaccattcttctttcttgaatctggatcttaacaacattatt
tttctcaatgcaataaaagcgttctcaccattaaagattcgtttgggcggaactttgcaa
gacaaagtcatataccaaactgaagatcataaacagccctgcgtctcatttgttagaaac
acaacagagatgtttggttttactccaggatgccttcccttgtctagatgggatgaactc
aatgcattctttaataaatctggggctagtataatttttggattaaatgctctttatgga
agatctgtacaccctgatggtttatccgtcggagcttgggatccaagcaatgctgaatcg
cttatacgttatactgtcaaaaagggatatgatatccatggttgggaactcgggaacgaa
ttgagtgggagcggagttggaaccagagttgcagcagatcaatatgcatctgatactatt
tccttgtacaaaatagtgcaagatgcttacaagaattttgaaactaaaccattggtcctg
gcaccgggaggtttctttgatgaaggctggttcaaggaattagtaaataaagccgggaca
tcatttgatgtggcaactcaccacatatataatctcggtccaggaagagatgaacacctt
cttgaaaaaatactcaatccatcttatctcgatggagaagctgatacatttagcaaactt
cagaatatcctcaagacctctgagagttcagtggttgcttggattggtgaggctggagga
gcttacaacagtggccgcaaccatgtcacaaatgcctttgcttttagcttctggtatttg
gaccagctagggatgtcagctgcctatgataccaagacatactgtcgacagacactgatt
ggtggaaactacggtttactcaatacgactacctttgtaccaaatccagattactacagt
gctcttctttggcaccgattgatgggaaggaacgttttgtcagcgagtttctcagggaca
aagaaaatacgtgcatatgctcattgcacgaagcaatctcaaggtatcacattactgttg
atcaaccttgatggaaacaccaccattcatgccagagttgattttaacggtactatgtta
catcggcgaaaacacagacatcatcataaccatagaaagagttcaattaaactgcctaaa
agtagtaaaatagcatcaaacacaagagaagaataccatttaacagcaaaagatggaaat
ttacaaagtcagataatgctgctaaatggaaatgcactaactgtggattcatctgggaat
atacctacatttgagcctatatttgtgaattcaacagagccgataaccgtcgcaccattc
tctattgtatttgtacacataccatatgtacttttgcctgcttgtagctga
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