Solanum dulcamara (climbing nightshade): 129891535
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Entry
129891535 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129891535
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129891535
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129891535
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129891535
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129891535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129891535
NCBI-ProteinID:
XP_055822901
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All DBs
Position
6:75064560..75072066
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AA seq
927 aa
AA seq
DB search
MGEATMDRMEENLGPQLIVSDPCMGTSSSLYHRKIEFHLARKPFNGFISGKNNSGFQLET
LNPNSETRKENGSLVGAGKKGGGDAVMESNGMDPEVSFGIAFRKIMRIGAGLQNLGNTCF
LNSVLQCLTYTEPLAAYLESGKHQNSCRMAGFCALCAIQKHVSRALQATGKILAPKDLVS
NLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLRS
QVQCMQCKFCSDKFDPFLDLSLEILRADSLHKALDHFTARELLDGGQRQYQCQQCKQKVK
ATKRLTIDQAPHVLTIHLKRFGSHVPGQKIDKKIHYGPTLDLKHFVSDTYGGELKYTLYG
VLVHAGWSTHSGHYYCFVRTSSGNWYSLDDNQVVQVSERKVLEQKAYMLFYVRDKKSPVP
KKLVDVARNDNVITNGIGNKIYSNHSQRFKDTAQNGFHVKNEDSLSGTKDQRETLSAEVS
KGTSTKVLAPSKVNGAVVSGFSSHGGAIQLENLSKVQETGDRVKDPSVVDARDGPSFLKA
KPAVPVSNGIHRLYNKGETRCGDSTPLPNGNVTIKELTCSAAIPFHCSSVSNDKDPSAPD
KLLNKDKQEECKANTNSRVVKDISYGSLGGSDVEVNNDVGQRKAGAESAGVVSQPTMTSS
TEKVATVKACLKTKKKSFKSRVSKMHLSFMILDPALGLKRKKKLKRMKHKIGKRKRSNPS
SVDESNSDLGPSTSKLSHTLISSSTHSQRKKSKFGSTEKVSSLDTKTAGRNGDLLRNTID
DARVVNNGTVLANDKQPQKSSSLASVGNQGVDNRQSTDSKETKVVATQKGLLNMLTRGLE
SSVARWDGVEVCFLNGVEAQNGNCGSIGYIGDEWDEEYDAGKRRKIRSSKIEFGGPNLFQ
EIASKKTKVKKARLERSSSANQPFRIL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagctacaatggatagaatggaggaaaatttgggtccacagttaattgtgtcg
gatccgtgcatgggtacatcgtcgtcgttgtatcatcggaagattgagtttcatttggcg
aggaagccgtttaatgggtttatcagtgggaaaaataatagtgggtttcagctagaaaca
ctaaacccgaattctgagacccggaaagaaaatgggtcacttgtcggcgccggaaaaaag
ggtggcggtgatgcggtgatggaaagtaatgggatggatccggaagtgagctttggaatt
gctttcagaaagattatgagaattggagccggcttgcaaaatcttgggaatacctgcttc
ctcaattcagtattacagtgtcttacatacactgagccattagcagcatacttggaaagt
gggaaacatcaaaattcctgtcgtatggctggtttttgtgctttatgcgccatccaaaaa
cacgtgagtcgtgctttgcaggcaactgggaaaatactggcgcccaaggatcttgtgtca
aacttgcgatgcatatcacggaattttcgaaatgctagacaggaggatgcacatgaatac
atggtgaatctacttgagtcaatgcataaatgttgcttaccttcaggagtgcctagtgaa
tcccccagtgcttatgagaaaagtttggttcataagatatttggtgggcgtcttcgcagt
caggtgcagtgcatgcagtgtaaattttgctctgacaagtttgatccatttctggattta
agtctagaaattttaagggcagattcactccacaaagcacttgaccatttcactgccaga
gagctattagatggtggtcagaggcagtatcaatgtcagcagtgcaaacagaaagtgaag
gctactaaacggctaacgattgaccaggcacctcatgtcctaaccatccacttgaagcga
tttggttcacatgtcccggggcaaaagatcgataaaaagattcactatgggcctacttta
gacttaaaacattttgtctccgatacctatggtggtgaattgaagtacacactctatggt
gtgctggttcatgcaggttggagcacccattctggtcattattattgctttgttcgtact
tcaagtggaaattggtactcccttgatgacaatcaggtggttcaagtaagtgagagaaag
gtgttggaacagaaggcatacatgttgttctatgttcgggataagaaatctcctgtgcct
aagaagctggtagatgttgcccgcaatgataatgtgatcactaatggcataggaaataaa
atatattctaatcacagccagagatttaaggatactgctcaaaatggatttcatgtgaag
aatgaggattccttatctggtacaaaagatcaaagggagacgttaagtgccgaagtttca
aagggaacttcaacaaaggttctggcaccctcaaaggttaatggtgcagtagttagtggg
ttctcttctcacggaggggctatacagctagaaaatttgtcgaaagtacaagaaacaggt
gacagagtaaaggacccttctgttgtagacgcaagggatggaccatccttccttaaagct
aagcctgctgtaccagtctccaatggaattcatagactttataacaagggtgaaacaaga
tgcggggactctaccccactacctaatggcaatgtaaccatcaaagagttgacttgctct
gctgcaataccatttcactgtagcagcgtaagtaatgacaaagatccaagtgctcctgac
aaactgttgaacaaagacaaacaagaggaatgcaaggcaaacaccaactctcgagtggta
aaagacatctcctatggcagtttaggtggttcagatgttgaagttaataatgatgttgga
cagagaaaagcaggtgctgaatcggccggagtagtgagccaaccaactatgactagctca
acagaaaaggtagctactgtcaaggcatgcttgaagaccaaaaagaagtctttcaagagt
cgtgtctccaagatgcatctcagttttatgatcttagatccagccttgggactgaaaagg
aagaaaaaactcaaacgaatgaaacataaaattggaaagaggaagcgtagcaatccaagt
tccgtggatgagagtaattctgatcttgggccatctacatccaaattgtcccatactttg
atatcttcttcaacgcattctcaaagaaagaagtcaaaatttggttccactgagaaagtt
tccagtttagatacgaaaactgctggacgcaatggggatctcctgaggaatacaattgat
gatgcgagagttgtgaacaacggcactgtattagcaaatgacaaacaaccacaaaaaagt
tctagcttggcatcagtaggaaatcaaggtgttgacaatagacagtctaccgattctaaa
gagactaaagtagttgcaacacagaaaggtctgttgaatatgcttaccagaggtttggag
tcaagcgttgctcgttgggatggtgtggaagtttgtttcttgaatggcgtagaagcacag
aatggaaattgtggctccattgggtacatcggggatgagtgggatgaggaatatgacgca
ggtaagagaaggaagattaggagctccaaaattgaatttggtggaccaaaccttttccaa
gaaattgcaagcaaaaagaccaaggtaaagaaagcgaggcttgagcgctctagctctgca
aaccagccattcaggatattataa
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