Solanum dulcamara (climbing nightshade): 129891543
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Entry
129891543 CDS
T09577
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129891543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129891543
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129891543
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
129891543
NCBI-ProteinID:
XP_055822913
LinkDB
All DBs
Position
6:75154075..75166082
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AA seq
735 aa
AA seq
DB search
MFDCGSKSQYLGGQREKFVRLDDLDSRLSSPSASLTTNTCGFNIEGLKRSNHATSSPSRS
FKKGVKKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVVSCIL
AVSVDPLFFYLPVFDNKTNCLQIDRKLAVTATTLRTVIDAFYLIHMALQFRTAYIAPSSR
VFGRGELVIDPAQIAKRYLRFYFIIDFFAVLPLPQIVVWRFLQSSTGSDVFTTKQALLYI
ILLQYIPRFVRVIPLTSELKRTTGVFAETAWAGAASYLLLYMLASHIVGSFWYLLAVERY
DTCWQQACKHNATCNTDFLYCGNQYMTGYNSWSSISDSVLNDACPANSDNSPFDFGIFDQ
ALSSGIIYSMKFVAKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIGLAILGLILFALL
IGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWQETRGVDEEN
IVQSLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAICERLKPCLYIENTHIVREGDP
VDEMLFIIRGRLESVTTDGGRSGFFNRSLLKDSDFCGEELLTWALDPKSGSNLPSSTRTV
KALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWGACFIQAAWRRYTKR
KLMELQRKEEEEAEALAAGSGNSSGTTYSIRATFLASKFAANALRGVHRNRNLKSARELV
KLQKPPEPDFSADAD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtggttccaagtcccaatatcttggggggcagcgagagaagtttgtaagg
ttggatgacttggattccagactatcctctccttccgcatcactaacaacaaatacatgt
ggcttcaacattgagggtttaaaacgttcaaaccatgcgactagcagtccgtcaaggtct
tttaagaaaggagtgaaaaaaggatccgaaggacttaaatcaattggtcgatcactggga
tttggtgtctctcgggctgtatttcctgaagatctgaaagtttcagagaagaagattttt
gaccctcaagataaattccttctgttatggaacaaactgtttgttgtatcatgtattcta
gccgtgtctgtggatccactgtttttctaccttccagtttttgataacaagacaaattgc
cttcagattgataggaagctagctgtcacagccactaccctacgtacagtgattgatgct
ttctatcttattcacatggctcttcagtttcgcacggcttatattgcaccatcatctcga
gtttttggacggggtgaacttgtgatagatcctgcacagattgctaaaagatacttgcga
ttctattttatcattgatttttttgctgtgcttcccttgccgcagattgtggtgtggaga
ttcctgcagagctcaacaggttctgatgtcttcactacaaagcaagctttgctttacatc
atcttgcttcagtacatccccagatttgttagagttatacccttaacttcggaattgaaa
agaactactggtgtctttgctgaaaccgcgtgggctggtgctgcgtcctatttgctattg
tacatgcttgctagtcatatagttgggtctttttggtacttgctagctgtggaacgctat
gatacatgctggcagcaagcttgtaaacacaatgcaacatgcaacactgatttcttgtac
tgtgggaatcagtacatgacgggttataatagttggagcagcataagtgactcagtctta
aatgatgcttgccctgcaaatagtgacaactcaccatttgattttgggatttttgatcag
gctttatcatctggcatcatttattccatgaaattcgtggctaaatattgttattgtctg
tggtgggggctgcagaacttgagtaccctcggacagggacttcaaactagcacatatccc
ggggagtctattttctctataggattggctatacttgggctcattctctttgcattattg
attggtaacatgcagacgtatctacaatctcttactattcgactcgaagagatgagagtt
aaaaggcgtgactcagaacagtggatgcatcatcggttactcccacaagatctccgagaa
cgggttaggcgctatgatcagtataagtggcaggaaactcgtggagtggatgaagagaat
atagtccagagcttacccaaggatcttaggagggatatcaagcgtcatctttgtctggct
ttagtgaagagggttcctctatttgagaatatggatgaaaggttacttgatgctatttgc
gagcgtctgaaaccatgtttatatatcgagaacacacacattgttcgagaaggagatcca
gtggatgagatgctcttcatcatacgaggccgccttgagagtgtgacaactgatggtggg
agaagtggtttcttcaaccgcagtttgttgaaagatagcgacttttgtggagaggaactt
ctaacttgggcactggatccaaaatctggctctaacctcccatcttccacgcgtacagtg
aaagctctgacagaagtggaggctttcgctcttacagcagacgagttgaaattcgttgcc
agtcagttcagacgtcttcacagtaggcaggttcagcacacattccgtttctactcgcag
caatggaggacttggggtgcttgctttatccaagcagcgtggagacggtacaccaagaga
aaacttatggaactccaacggaaggaagaagaagaagccgaggcattggctgcaggcagt
ggcaattctagtggcactacttacagtatccgtgctacgttcttggcatcgaaatttgca
gcaaatgccctccgaggcgttcataggaatcgtaatctcaagagtgctagggagctggtg
aagctacagaaacctccagagccagattttagtgcagatgcagattga
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