Solanum dulcamara (climbing nightshade): 129891584
Help
Entry
129891584 CDS
T09577
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
129891584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129891584
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129891584
Membrane trafficking [BR:
sdul04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
129891584
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129891584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
129891584
NCBI-ProteinID:
XP_055822967
LinkDB
All DBs
Position
6:76126369..76134218
Genome browser
AA seq
365 aa
AA seq
DB search
MANQPFSYPILCASFNQDNSCFAIGTREGFKIFDCNTGRLLYERAAGAFILVEMLFSSSL
LAIVGAGEQPSLSPRRLCLFNTVTGVALEELNFITSILAVRMNKKRLIVILQEKTFIYDI
NSLKILDTIDTVSNPKGLCAFSPSLDGSFLALPASTTKGSLLVYNVSDLRLHCEIDAHRS
PLAVLSLSLGGTHIATASEQGTMIRVHLVSDATKSYSFRRGSYSSNIFSLSFAPAAELPD
ILLATSSSGSVHVFSLGSPPNQRSSGLLGSIKVPHTINDALDPAQHCILHRAVPAGVRSN
TLIRKIEKFDETATPEHVVLRATISMITYRGYFLEYVYNVNHQNKSSWTLEREFNLLTAE
TSSLS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaacccttttcttacccaattctttgtgcttcattcaatcaagacaacagt
tgttttgctattggaacaagggaagggttcaaaatctttgattgtaatactggaagactc
ctatatgaaagagctgctggagcatttattttagtagaaatgttgtttagctcaagcctt
ctagcaattgttggagctggtgaacagccgtctttgtctcctcgaagattgtgtttgttt
aatactgtgactggagtagctcttgaggaactaaacttcataacttctatccttgctgtt
cgcatgaataagaaaagattgattgtcatattgcaggagaagacatttatttatgatata
aacagtcttaagatactggacacaattgatacggtatcgaatccaaaaggactttgtgca
ttttcacccagcttggatggttcatttttggctcttccagcaagtacaaccaaaggatct
ttgttagtctataatgtttccgacctccgtttgcactgtgagatagatgctcatcgctca
ccattggcagtcttgagtctttcattgggtgggactcacattgcaacggcatctgaacaa
gggaccatgatcagagttcatcttgtttcagatgcaactaagtcatatagcttcaggaga
ggatcatactcttcaaatatcttttctttgtcattcgctccagcagctgaacttccggat
attcttcttgcaactagttcttctggttctgttcatgttttctctttgggttcaccccca
aatcaaaggtcttctggtcttctaggatcaataaaagtacctcatactattaacgatgcc
ctagatcctgctcagcattgcatactgcatcgtgctgttccggctggagtgagaagtaac
acattgatccgcaaaatagagaaatttgacgagacagcaacacctgaacatgtggtacta
agagccactatatctatgatcacctacagaggatacttcctggagtacgtctacaacgtc
aaccatcagaacaagtcttcgtggaccttagaacgggaattcaatcttttaacagcagaa
acatcctcgttatcatga
DBGET
integrated database retrieval system
