Solanum dulcamara (climbing nightshade): 129891585
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Entry
129891585 CDS
T09577
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129891585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129891585
03012 Translation factors [BR:
sdul03012
]
129891585
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129891585
Translation factors [BR:
sdul03012
]
Eukaryotic type
Release factors
129891585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
129891585
NCBI-ProteinID:
XP_055822968
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Position
6:76134965..76139549
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AA seq
438 aa
AA seq
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MMADGHDNDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTAS
NIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITEDGKEKKVTIDFEPFRPI
NASLYLCDNKFHIEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQ
SDMFDPRLQAKILNVVDVSYGGENGFNQSIELSAEVLANVKFIQEKKLIGKYFEEISQDT
GKYVFGVDDTLKVLEMGAIETLIVWENLDINRYVLKNNTSGETIIKHLNKEQDTVQSNFR
DPDTNAELEVQDKLPLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQVD
VRDFDELSDDGEVYEDSE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagatggtcacgataacgataagaatatcgagatatggaagatcaagaaactt
ataaaggcacttgaagctgctcgaggcaatggtaccagcatgatttctctaatcatgcct
ccacgggatcaagtatctagggtcactaagatgcttggagatgaattcggaactgcatca
aacatcaaaagtagagtgaatcgtcaatctgtgctgggtgcaatcacatctgctcagcag
agacttaaactctacaacaaggttccaccgaatgggcttgtgctttataccggtacaatc
ataactgaagatgggaaagagaagaaggttacaattgattttgagcccttcaggcccatt
aatgcatctctatatctttgtgataacaagttccacatagaagccttgaatgaacttttg
gaatccgatgacaagttcgggtttattgtgatggatgggaatgggacactttttgggaca
ttgagtggaaataccagggaggtccttcacaagtttagtgtcgatctgcccaaaaaacat
ggaagaggaggacagtctgcactacgttttgctcgtcttcggatggagaaacgtcacaac
tatgtgaggaaaacagcagagcttgcaacccagttttatattaatcctgccaccagccag
cccaacgtttcaggcctgatactagctggatctgctgactttaagacagagcttagccag
tctgatatgtttgatcctcgtcttcaggcaaagattttaaatgtggtcgatgtttcttat
ggaggggaaaatggtttcaaccaatcaattgagctgtctgctgaggtcttggccaatgtg
aaatttatacaagagaagaaattgattggaaagtattttgaggagataagtcaggacacc
gggaagtatgtttttggggttgatgataccttgaaagttctggaaatgggtgctattgag
acccttattgtgtgggaaaatctggacattaataggtacgtgttgaaaaataacacttct
ggagaaacaatcatcaagcacttgaacaaggagcaagacactgtccaaagtaacttccgt
gatcctgatacaaatgcggaattagaagttcaggataaattgccactacttgagtggttt
gcgaatgagtacaggagatttggttgtagtttggagttcgttacaaacaaatcacaagaa
ggatctcagttttgccgtggttttggtggcattggaggcattctccgctaccaggttgat
gttagagattttgatgaactttctgatgatggtgaggtttacgaagattctgaatag
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