Solanum dulcamara (climbing nightshade): 129891674
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Entry
129891674 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129891674
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129891674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129891674
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129891674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
129891674
NCBI-ProteinID:
XP_055823089
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All DBs
Position
6:79785083..79795991
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AA seq
811 aa
AA seq
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MITGGRSLISSQPAFSNDAKKLLVCTGNTVSIFSTSTGLQITELEGHRGLVTSVVVVPST
TPVGKLLCYCWTSSDDGTIKYWDFSVPELMRSIDVKFPIHSMVIPGLSSQPRESSEKPSD
LFAYVSIRVLKEQLGESKTLWSQIRKCNLTKSTLVGGVTLAESKNALSITLSCSGRYMGI
CDKHKLRIWEIPTKDSDQSVLQKIRLHHTKTLTTLAFHPTDKIVSAGDVTGRILIWRGVG
EHNFSSRNKQRSGGLMTDMEENPGVRGIDDSDSCTTRHWHSAEVKVLFFSSDGAYLYSGG
KEGVLVVWQLDSGKQKFLPRIGSPLSYFTISSDPSLSSISCADNRVHLLKMPSMEVLRSI
QGIKLRSTILDISDSSSEGIVFDSATGLVAIRSENYCIQFYSLFDDREVSEVQVCERSHQ
PADEVMVVVDLVALSPEGSFMITVETRFAEEGIGGLVSLKFWSCSSSNKDFSLSTVVYEP
HRDSGISSIAFHPSRHMAVTTSRGADFKVWVGSQEMQQKKQMQNAGWTCHSVGSYKKKPM
TAAAFSGDGSVLAVAAERVITLWDPERNILVATVGESLEPISSLAFIGKSEYVVTTSQGY
NAQVSVWSMSKLSVSWSYKLKIEAVTCAMDDSLFAILAPLPKSVGSVMSNGATTPDGDGV
ILLFRAGDHVPIAIWFVRKAKGASLAFIRRSPKSEDGVTDGRSVQLLLAYLNVDHEYVLF
DPLDSRTHIHKISRGNLADLEETGKFGYASLYGDLPDFSLERKQAPSITSVPSDRYWETL
FSGPSHNLPPLAKLCSTFLESLLQKRSSAVE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattacaggcggaagaagtttgatttcttcacagccggcattttcaaatgatgcgaag
aagcttctcgtatgcacaggaaacaccgtttctatttttagcacctccactggcttacag
attactgaattggaaggtcataggggattggtgacatcggtagtggtagtaccatctact
actccggtaggcaaacttttgtgctactgttggacatcatctgatgatggtactattaaa
tattgggacttttcggtgccggagctgatgagaagtattgatgttaagttccccattcac
tcaatggtaattccaggcttatcatcacaacccagagagagtagcgaaaagccttctgat
ctttttgcatatgtatctataagagtgttgaaagaacagctgggagagagtaaaacttta
tggtcgcagataaggaagtgtaacctaaccaagtctactttggttggtggagtgactctg
gctgagagtaaaaacgcactatcgataacattaagctgctctggaagatacatgggcatc
tgtgacaagcacaagcttcgcatttgggaaataccaacaaaagattctgatcaatcagtg
cttcagaaaatcagattacatcatacgaaaactctgaccactctagcttttcatccaaca
gataaaattgtttcagctggagatgtaacaggaaggatcttaatatggaggggtgttggg
gagcataatttctcatctagaaataaacagagaagtggaggactaatgacagacatggag
gagaatcctggagttaggggaatcgatgattctgattcttgtaccacaaggcattggcac
tctgcagaagtgaaagttctctttttttcttccgacggtgcttatctgtactcaggtggg
aaggaaggagttctcgtggtttggcagttagactctgggaagcagaaattcctcccgcga
ataggatcccccctttcgtattttaccatctcatctgatccttctctgtcctctatatct
tgtgcagataaccgagttcaccttcttaaaatgccctcgatggaggtattgagatccatt
caaggaatcaagcttcgtagcacgatcttggatatatctgatagctcatctgaaggaatt
gttttcgactctgccactgggctagttgccatacgttcagaaaattactgtatccagttc
tatagcttgtttgatgaccgtgaggtttctgaggttcaagtttgcgaaagaagccaccaa
ccagctgatgaagtcatggtggtagtggatttggtggccctctctccagagggttccttc
atgattacagtagaaaccaggtttgctgaagaaggaataggaggtcttgtgagtctgaag
ttctggtcatgcagctcttcaaataaagacttcagcttatccacagttgtctatgagccc
cacagagattctggtatttcgtccattgctttccatccttcgcgtcacatggctgttacc
acctcacggggtgctgatttcaaggtttgggtcggcagtcaggagatgcaacaaaaaaaa
cagatgcaaaacgctggatggacatgccattctgttggttcctacaagaaaaagccaatg
acagctgctgccttttctggagatggttctgtgctggctgtagctgcagaaagagtcatt
acgttgtgggatccagagaggaatattcttgtggcgacagttggggaaagtcttgagcca
atctcttccttagcatttattgggaagtcagagtatgttgtaaccacatcacaaggttat
aatgcacaagtatcagtgtggagcatgtcaaagctgtctgtatcatggtcttacaaactt
aagatagaagctgtaacttgtgcgatggatgactccttgtttgccatcctggcccctctc
ccaaagtcagttggatctgtgatgtctaatggagccacaactccggatggggatggcgtc
atcttattattcagagctggagatcatgttcccatagcgatctggtttgtaagaaaggca
aaaggtgcttcacttgctttcattcgcagaagtcctaagtcggaggatggtgttactgat
ggcagatcagtgcagttgctattagcttacctaaacgttgatcatgaatatgtgcttttt
gatccactcgacagtcgcacccatatacataagataagccgaggaaatcttgctgatctt
gaggaaacagggaagttcggttatgcatctctgtacggggacctaccagactttagctta
gagagaaaacaagctccatcgatcacatcagtaccatcagatagatattgggagacgcta
ttcagtggaccatctcacaatcttcctcctcttgctaaattgtgttccacattcctggaa
tcattactgcagaagaggagtagtgcagttgagtga
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