Solanum dulcamara (climbing nightshade): 129891716
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Entry
129891716 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129891716
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129891716
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129891716
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129891716
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129891716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
129891716
NCBI-ProteinID:
XP_055823145
LinkDB
All DBs
Position
6:complement(3745821..3756600)
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AA seq
966 aa
AA seq
DB search
MLEPRETDIPSLFLVLVVLPLVSYILLGKWNEAAKKKERVGLLAQRAAEEAHKTQTMPVV
SITPIPLVPLPSSATHQCARCHSPATTRCSQCKSVRYCSGKCQILHWRQVHKLECLQLGN
NCNSSFSKPMLTDELLGRVSFDSYVEAQYSENNLNQSWLGKTSPDGVTETPIVTPVAPIV
VSVAMDTSGAPKVGRRSIDKRVQKGNRDILRRGDGTMSESSERASQSRSRDSDSMLSEHD
SIADGFNSEHADLMNTMGECHMLQKQKEHISRNHRHVSSSLNLEGHETSACKNQKELIDE
NSLTREGVVNGTPAIPLNCSSGKTSTRRSSRAKSASPSLGTKSHKMPKTSREEMCSGLEG
KGQNIDESKNARRKDAVPPQAGNGVANLGIMRMFGLAKSSKVVGHQSLESRVDKHKKLKM
LFPYEEFVKLFEYEDFTLLPRGLINCGNSCYANAVLQCLMCTKPLTIYLLHRSHSRAYCR
RDWCLVCELEQHVMMLRESGGPLSPNRILLHMRSINGQIGNGSQEDAHEFLRFLVASMQS
ICLEALGGENAVDPRLQQTTFIQHTFGGRLRSKVKCLRCHHESACYENILDLSLEIFGWV
ESLEDALTQFTSPEDLDGENMYRCGRCACYVRAQKQLSIQEAPNILTIVLKRFQEGSYGK
INKCITFPDMLDMIPFMTGTDDIPPLYMLYAVVVHLDTLNASFSGHYISYVKDLHLRGNW
FRIDDTEVHPVSMSQVMSEGAYILFYKRSSPRPARKISRRQAPGIVKHCPPKSTKTSRPE
QIKVEHLYVGVDPYANHRPEMNSDIIDYTSDGLVKNANRNRPPAVGTYTESMTIEFSDAT
SSDWSLFTSSDEASFTTESTRDSFSTVDYADASVADPFSSIINNLCASEYSSNRTVACSM
FSSSKPHTRFFSERKGSVLDSTAGARILNEVTVPYSEGFHSDSSTSVHVEYDSEPRYGQT
YCPPNV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagccaagggaaaccgacattccgtctttatttttggtcttggttgtgcttccc
ctggtttcttatattcttctaggcaaatggaatgaggcagccaaaaagaaagaaagggtt
ggtttgctggctcaacgggctgctgaagaagcacataagacacaaactatgcctgtagta
agtattacccctatccctcttgtgcctttgccaagcagtgcaactcatcagtgtgcaaga
tgccatagtccagccacaactcgctgctctcaatgcaaatctgttcgatattgctcaggg
aagtgtcagattctccattggagacaggtccacaagctagagtgtcttcaattgggtaat
aactgcaacagctcattctctaagcctatgctgactgatgaactcctgggacgagtgtca
tttgatagctatgttgaagcgcagtacagcgaaaacaacctaaatcagtcatggcttggc
aaaacttctccagatggtgtcactgaaactccaattgtcacaccagttgcccctattgtt
gttagtgtggcaatggatacatcaggagctccaaaagttgggagacgatctatagacaag
agagtacagaaaggcaacagagacatattaagaagaggggacggaactatgtctgagagt
tctgaacgagcctctcaatctaggtcaagagatagtgattccatgctttcggaacatgat
agcatcgcagatgggttcaatagtgaacatgctgatttgatgaatacaatgggagaatgc
catatgttacaaaagcagaaagaacacatctcaagaaatcatcgtcatgtttcaagttca
ttgaacctagaaggccatgaaacaagtgcatgcaagaatcagaaggagctgattgatgaa
aatagccttacacgagaaggcgtcgttaacggcactccggcaattccattgaactgttct
tctggaaagacttcaacaaggagaagcagtagggctaaaagtgcatcaccttctctagga
acaaagtcccataagatgccaaaaacatcaagagaagaaatgtgttcaggtttggaaggg
aagggacagaatattgatgagtcaaaaaatgctagaagaaaggatgctgtccctccacaa
gcaggcaatggggttgcaaacttgggaattatgagaatgtttggtctggctaaatcgtca
aaagttgtcggacatcaatctttagaatccagggttgacaaacacaagaaactaaagatg
ctgtttccttatgaagagtttgtgaagctatttgaatatgaagacttcactttgttgcct
agaggtctcataaactgcgggaatagttgttatgccaatgctgtcttgcagtgtctgatg
tgcacaaagcctttaactatctacctacttcacagatcacattctagagcttactgcagg
agagattggtgccttgtgtgtgaacttgagcaacatgtgatgatgttaagagagagtgga
ggtcctctgtcaccaaacaggattcttttgcatatgcggagtattaatggccagattgga
aatggcagtcaggaagatgctcatgagtttttaaggtttcttgttgcttctatgcaatct
atatgtttggaggcattaggtggagaaaatgctgttgatccgagattgcagcaaacaacc
tttatacaacacactttcggagggcgacttagatctaaggtcaaatgtctgagatgccac
catgagtcggcgtgctatgaaaatatcttggatctctcattggagatctttggttgggtt
gagtctcttgaagatgcattgacacagtttacaagcccggaagatcttgatggggaaaat
atgtatagatgcggaaggtgtgcttgttatgtccgtgcacaaaaacagttgagcatacag
gaggctccaaatatcttaaccattgtcttgaagagatttcaggaaggaagttatgggaag
ataaataagtgcatcacatttccggatatgttggatatgatcccatttatgactggaaca
gatgacattcctccactttacatgctttatgctgttgttgtgcacttggataccctaaat
gcatcattttctgggcattacatatcctatgtgaaggatctacacctacgtggcaattgg
ttcaggattgacgatactgaggtacaccctgtatccatgagccaggtgatgtcggaagga
gcatatattttattttataagagatcatctccacggccagcaagaaagattagccgaaga
caagctcctggaattgtcaagcactgcccaccaaaatcgacaaagacttctaggccagag
cagataaaagtggagcatctttatgttggtgtggatccttatgcgaatcataggccagaa
atgaacagtgacatcattgattacacctctgatggactcgtcaaaaatgctaatagaaat
agaccgccggctgtgggaacctatactgagtcaatgactatagagttttctgatgctaca
tcaagtgattggtccctctttacaagctcagatgaagcatcatttactactgagagtacc
agagactcttttagtactgttgattatgcggatgcaagcgttgctgatcctttctcttcc
atcatcaacaacttatgcgcatcagagtattcttctaacagaactgtcgcgtgtagtatg
ttttcaagtagtaaacctcatacaagattcttttcagaaaggaagggttctgttttggat
tcaactgccggggctagaattctgaacgaggtcactgttccttattctgaaggttttcat
agtgatagtagtaccagtgtacatgtagaatatgatagtgagcctagatatggacaaact
tactgtccacctaatgtgtag
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