Solanum dulcamara (climbing nightshade): 129891759
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Entry
129891759 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129891759
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129891759
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129891759
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129891759
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129891759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129891759
NCBI-ProteinID:
XP_055823212
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All DBs
Position
6:3957671..3970120
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AA seq
689 aa
AA seq
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MAYLQMNWQPNLLTHRRKTGPPLGLKNLGNTCYINSVLQCLTYTPPLAYFCLKSQHSASC
DSEAAAASGKKSECPFCILEKRIARSLSLDSALDTPSKINSCLKIFAQHFRFGRQEDAHE
FLRYVIDACHNTCLRLKKLQQQTRKGGGGSVDGNGNTIVKEIFGGALQSQVKCLSCGAES
NKVDEIMDISLDVLHSSSLKDALQRFFQPEVLDGNNKYKCENCKKLVTARKQMSILQAPN
VLVIQLKRFEGIYGGKIDKPIAFEEVLVLSSYMCKASQDLHPEYNLFGTIVHSGFSPDSG
HYYAYIKDTMGRWFCCNDSYVSPKLLQEVLSEKVYILFFSRTKQRSPPTKTCLSINGSKS
NHSNGLAKSKILTSDLAKAENGKQVLGHPSEKENAMTSKVSKVHSSPVRELGIFERSSIK
KVSTSGNIKMVFHPRESGNRTGGVRASVLTGKEITSLPDRNGVNKSCGNGQVTRSHASMN
GNGNGNGKLPIVATSPVADGPHQDYGGSNGNAAGKDPYPKEVTRSSSLSNGNGKTLCVAT
DTLRGSLHRNNGENSESLAAITSVYRDMSNGHVESSSISGSKRKSPDQCILLDHDAQSRA
KVEELKKELHQEASSFLRTCGWSEEVYAFMRSKKSGALSDFQASDVNAMKELLITDAKSM
FISQLPQSLKGSLIERLTSFSQGTPPSST
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcctatttgcaaatgaactggcagccgaacctactcacccacagacgcaagactggt
cctcctttagggcttaaaaacctcggcaatacctgttatatcaactccgtccttcagtgc
ctcacttatacccctcctcttgcttatttctgcctcaaatctcaacattccgcttcttgt
gattctgaagcagcagctgcttcagggaagaaaagtgaatgtcctttttgtatattagag
aagcgaatagctaggtctttgagtctcgattcagcactagatactccgtccaagattaat
agttgcttaaagattttcgcccagcattttaggtttgggaggcaagaggatgctcatgaa
ttcttgcgatatgtcattgacgcctgtcacaatacgtgtttgcggttgaagaagttgcag
cagcagacaaggaagggtggcggaggtagtgttgatgggaatgggaataccattgttaag
gagatctttgggggtgctctgcagagccaggtcaagtgcttgtcatgtggtgctgagtca
aataaggtggacgagattatggatataagtcttgatgtgttgcacagtagctcactcaaa
gatgctttgcagagattttttcagcctgaggttttggatggaaacaacaagtacaagtgt
gagaactgtaagaaattggtgacagcaaggaagcaaatgtcaattcttcaagcaccaaat
gttcttgtcattcagctcaagaggtttgaaggaatatatggtgggaagattgataagccc
attgcattcgaggaggttctagtgctttcaagctacatgtgcaaagcgagtcaggatctg
catccagaatacaatctttttggaacgattgtccactcaggcttttcaccagattcaggg
cactattatgcatatatcaaggatactatgggtcgttggttctgctgtaatgattcttac
gtttctcctaaactcttgcaagaagtgttgtcggagaaggtgtacatccttttcttctct
cgtaccaaacagaggtcaccacccaccaagacatgtttatcaattaatgggtcaaagtcc
aatcactccaatggcttggctaaatccaaaatcttgaccagtgacttagcaaaagcagaa
aacggaaaacaagttttaggccacccctccgagaaagaaaatgcaatgacatctaaggtc
agtaaagtgcattcaagcccagtgagagagttgggcatatttgaaagatcttccatcaag
aaggtatctacctctggtaatatcaaaatggtttttcatccaagagaatctggcaataga
actggtggtgtgagagcatcagttcttacagggaaagagattacatcattaccagacagg
aatggtgttaacaaaagttgtggtaatggccaagtgacaagatcacatgcctcaatgaat
ggaaatggaaatggaaatggaaaacttccaattgtagcaaccagccctgtagcagacggt
ccccatcaagattatggtggaagtaatggaaatgctgcaggaaaggatccataccccaaa
gaggtgactagatcatcatctttatcaaatggaaatggcaaaaccctatgtgttgcaaca
gataccttgaggggaagtctgcatagaaataatggggagaatagtgaaagtctggcagca
ataacttctgtatacagggatatgtccaatggccatgttgaatcgtcttctatctcaggt
tcaaagagaaaatcaccagatcaatgcatcctgcttgatcatgatgctcagtctcgtgca
aaggtggaagaattaaaaaaagagctccatcaggaagcttcatcatttctaagaacatgt
ggttggtcagaagaagtctatgcttttatgcgttccaagaagtcgggggcactatcagac
tttcaagcatcagatgttaatgcgatgaaggaattattgattacagatgccaaatcaatg
ttcatctcacagcttcctcaatcattgaagggaagtcttattgaacgtctaacatcattt
agtcaaggaacaccaccctccagtacctaa
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