Solanum dulcamara (climbing nightshade): 129891932
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Entry
129891932 CDS
T09577
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129891932
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129891932
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129891932
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
129891932
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129891932
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129891932
Prokaryotic type
129891932
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
129891932
NCBI-ProteinID:
XP_055823396
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All DBs
Position
6:complement(11011720..11018494)
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AA seq
664 aa
AA seq
DB search
MKYVGALGKTMALSLSLCSLFTLSPLKKPFSSLPIRQYRILFVLDPSKSNNTTRKKLLRR
RNSFCPHASAALQEAPAPNEKIVLPTNESSDGLLRIRHTCAHVMAMAVQKLYPNAKVTIG
PWIENGFYYDFDMEPLTDRDLKRIKKEMDRIISRNLPLVREEVSRDEAQRRIMSINEPYK
IEILKSIQEEPITIYHIGDEWWDLCAGPHVETTGKINKKAIELESVAGAYWRGDVKKPML
QRIYGTAWENEDQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAIIR
HIIEDTWKKIHMERGYDLLYTPHVAKADLWKISGHLDFYKENMFDQMEIEEELFQLRPMN
CPYHVLIYKRQLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQI
KDEIRGVLDLTEEILQQFGFDKYEVNLSTRPEKAVGDDEIWDRATSALKDALEDKSWSYQ
IDDGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNQERKRPIMIHRA
VLGSLERFFGVLIENYAGDFPLWLSPIQARVLPVTDAQLQYCNELGKKLKANGIRAEVCS
GERLPKLIRNAEKQKIPLMAVVGPKEVETQTITVRSRFAGELGNMSIDEFISRTKTASEN
RSFL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgttggcgctctagggaaaacaatggctttatcactatctttatgctctctc
ttcaccctttctcctctcaaaaaacccttttcttccttaccaattcgacaatatcgtatt
ctttttgttcttgatccttccaaaagcaacaacactactaggaaaaagttgctgagacgc
cgcaattctttctgtccccatgcttccgccgccctacaagaagctcctgccccaaatgag
aaaattgttctcccaactaacgagtcatccgacggactccttagaattcgccatacgtgt
gctcatgttatggccatggcagtacaaaagctctacccaaatgcaaaagtgactattggg
ccctggattgaaaatggtttttattatgattttgatatggagcctttgactgatagagac
ctgaagaggattaagaaggaaatggatcgaattatcagccgaaacttgcctcttgttaga
gaagaagttagccgggacgaagctcagagaagaataatgtctatcaatgaaccttacaag
atagagattttaaagagcatacaggaggaaccaattaccatatatcatattggtgatgaa
tggtgggatctttgtgcgggacctcatgttgaaactacaggaaagatcaacaaaaaagct
attgaacttgaatctgttgctggtgcttactggagaggagatgttaagaaaccaatgctc
caaaggatttatggcaccgcatgggagaatgaggaccaattaaaagcataccttcatttc
aaagaagaagctaaacggcgtgatcaccggcgaattggccaagatcttgatctcttctcc
atacaggatgaagctggtggaggcttagtgttctggcatcccaagggagctatcattagg
cacataatagaagatacttggaaaaagattcatatggagcggggctacgatttgctctat
actccccatgtagcgaaggcagatctttggaagattagtggtcatctggacttctacaaa
gagaatatgtttgatcagatggagattgaggaagagcttttccagcttcggccaatgaac
tgcccttatcatgtactgatctataagaggcagttacactcttatcgggattttccaatc
agagttgcagagctgggaacagtgtatagatatgagttatctggaagcttacatggcctt
ttccgtgtaagaggttttactcaggatgatgcacacatcttctgtttagaggatcaaatt
aaagatgaaatcagaggcgtgttagatctgactgaggaaatattacagcaatttggtttt
gacaagtatgaggtgaacctttcaacaaggccagaaaaagctgttggagatgatgagatt
tgggatagagcaacatctgcacttaaggatgctttagaagataaaagttggagctatcag
atagatgatggtggtggggccttctatggtccaaagatagatctgaaaattgaggatgct
cttggaaggaagtggcaatgctcaactatacaggttgatttcaatttaccccagcgcttt
gacattacatatgttgattcaaatcaagagaggaagcgacctatcatgatccatagagca
gttcttggatctttggagcggttttttggtgttctcatagagaattatgctggtgatttt
ccgctttggctttctcccatccaagctcgagttttaccagttactgatgctcagctccag
tactgcaatgaattaggcaagaaactaaaagctaatggtatccgggctgaggtttgcagc
ggcgagcggctgccaaaactcattaggaatgcagagaagcaaaagatcccattgatggct
gtagttgggcccaaagaggtagaaacacaaactataactgttcgatctcggttcgcaggg
gagttagggaacatgtccattgatgaatttatcagcagaacaaagactgctagtgaaaac
cgttcattcttatga
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