Solanum dulcamara (climbing nightshade): 129892059
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Entry
129892059 CDS
T09577
Name
(RefSeq) zinc finger CCCH domain-containing protein 2
KO
K23047
E3 ubiquitin-protein ligase UNKL [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129892059
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129892059
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129892059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
Keratin_matx
Motif
Other DBs
NCBI-GeneID:
129892059
NCBI-ProteinID:
XP_055823569
LinkDB
All DBs
Position
6:complement(6303708..6305530)
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AA seq
426 aa
AA seq
DB search
MEGLCAELHHHKFHPSHQLYKKSLRDIDIPPRKLLNRRSTLSSSIDHHVISDVQFMDSPK
SGGLGAESDTIFQKFLPYNSLDDDDDADPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH
PGEKARRRDPRRFHYSGTVCSEFRKGNCSRGDNCEFAHGVFECWLHPTRYRTEACKDGKN
CKRKVCFFAHTPRQLRVLPPSCYESGSSPKNLNSPIEKKYRNLNHCCVFCHSVSASPTST
LIGMSHISPPLSPSLSPPLSPANRNQFSSPMPRYTDRFGSVESSSSGMGQLDPSGLMSYK
DALTELVSSLEAMNVNHEPNSSAASHSHSVNFDGNLPWLDVNFNNNNSYDDQQQQFLLSP
STPSPNPISNSRTKFYTREFPSPSPVSSSSFSFEEETSNNNATNRYYSDNGLGGGPDLGW
VNDLLT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtctttgtgctgaactacaccatcacaagtttcatccttcacaccaactctac
aagaaatctcttcgtgacattgacattccaccaagaaaactcttaaaccgacgttctact
ctttcatcatcaatcgatcaccatgttatttctgatgtgcagtttatggactcgcctaag
tctggagggttaggagctgagtcggatactatatttcagaagtttttaccgtacaatagc
ttggatgacgatgacgatgctgatccatactcgtctgaccattttcgtatgtacgagttt
aaagtaaggcgatgtacgcgaagcaggagccacgattggactgactgtccttttgcccat
cctggtgagaaggctcgaaggagggatccgaggaggtttcattattcagggacggtttgc
tcggaatttcggaaggggaattgtagcaggggtgataattgtgagtttgcacatggggtg
tttgaatgttggcttcatccaactaggtataggactgaagcatgtaaagatggaaaaaat
tgcaaacgaaaggtttgtttctttgcacatactccaaggcaacttcgtgttcttccacct
agttgctacgaaagtggttcatcaccgaagaatttgaattcccctattgagaagaagtac
cgaaatttgaaccattgttgtgttttttgccattctgtttctgcttccccaacttctact
ttaatcggcatgtcacatatctcaccccctctctctccatccctctcaccgcctctttcc
cctgcgaatcgaaatcaattttcatcgcctatgccgcgttacaccgatcgttttgggagc
gttgaatcgtcatcctctggaatgggtcagcttgatccatctgggctgatgagttacaaa
gatgcacttactgaattggttagctcattggaagctatgaatgtgaatcatgaacccaat
tcttcagctgcttctcattctcattctgttaattttgatgggaatttaccatggctggat
gtgaatttcaacaataataatagttacgatgatcaacagcagcagttccttctatcgcct
tcaactccatctccaaatccaatttctaattcgagaaccaaattctacacaagggaattt
ccatctcctagtcctgtttcgagctccagtttcagctttgaagaagaaacgagtaacaac
aatgctaccaacagatactacagtgacaatggattaggtggaggaccagatcttgggtgg
gtcaatgatctcttgacttaa
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