Solanum dulcamara (climbing nightshade): 129892142 Help Entry 129892142         CDS       T09577                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism sdul  Solanum dulcamara (climbing nightshade) Pathway sdul03013   Nucleocytoplasmic transport sdul03040   Spliceosome Brite KEGG Orthology (KO) [BR:sdul00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129892142   09122 Translation    03013 Nucleocytoplasmic transport     129892142  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sdul03019]     129892142    03041 Spliceosome [BR:sdul03041]     129892142 Messenger RNA biogenesis [BR:sdul03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      129892142 Spliceosome [BR:sdul03041]  Complex C   Other components    EJC/TREX     129892142  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     129892142 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_WDR75_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_EML Beta-prop_DCAF12 Tricorn_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_IFT80_2nd Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR11_1st WD_LRWD1 CNH DUF7099 Motif Other DBs NCBI-GeneID:  129892142 NCBI-ProteinID:  XP_055823668 LinkDB All DBs Position 6:48676..54203 Genome browser AA seq 313 aa AA seqDB search MAETIPFKNLHSREYQGHKKKVHSVAWNCSGTKLASGSVDQTARIWQIEPHGHGKVKDVE LKGHTDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGT HVAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTSGDMFFLTTGNGTVEVLAYPSL QAVNTLNAHTAGCYCIAIDPLGRYFAVGSADSLVSLWSIKEMLCLRTFTKLEWPVRTISF NHTGDYIASASEDLFVDIANVQTGRSVHQIPCRAAMNSVEWNPKHNLLAFAGDDKNKYQA DEGVFRIFGLESA NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggcggaaacaatacccttcaaaaacctccatagcagagaataccagggacacaagaag aaggtgcattcggtggcatggaactgcagtggcacaaaattagcctcaggttctgtggat caaacagctcgtatttggcaaattgagcctcatggtcatgggaaggtgaaagatgttgaa ttaaagggtcacaccgacagtgttgaccagttatgttgggatcccaaacatgcagaattg atagctacggcatctggtgacaagacagttcgattatgggatgctcgtagtgggaaatgc tcacaacaagttgaactcagtggggaaaatattaatatcacttacaagcctgatgggaca catgtagctgttgggaacagggatgatgagctaacaatattggatgttcgcaagtttaag cctattcataagcgcaaatttaattatgaggtaaatgagattgcatggaacacgagtggc gatatgttctttcttacaactggaaatggaactgtggaagtcttagcttatccatctcta caagccgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatcca ctaggaagatattttgctgttggaagtgctgattcattggtcagcctttggagcattaag gagatgctatgtcttcgaacatttacaaagcttgagtggccagttcgaacaattagtttc aatcacacaggagactacattgcctctgctagtgaagatttgtttgttgatattgctaat gtccaaactggacggtcagttcaccagattccatgtcgtgctgctatgaacagtgttgaa tggaatccaaaacacaacttgcttgcctttgctggggatgataagaacaagtaccaggct gatgaaggcgtgtttcgcatatttggccttgagagtgcataa

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