Solanum dulcamara (climbing nightshade): 129892207
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Entry
129892207 CDS
T09577
Name
(RefSeq) transcription activator GLK1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129892207
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129892207
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
DNA_pol3_a_NII
Motif
Other DBs
NCBI-GeneID:
129892207
NCBI-ProteinID:
XP_055823738
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Position
6:complement(6170923..6175494)
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AA seq
464 aa
AA seq
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MLAVSPFSSTTVRDERDNEMESFAMGGGGGGGDDFPDFMGENLLDSIDFDDLFVGINDGD
VLPDLEMDNEILADFSVSSGDESDVNNYSTSNTFITTAIKNVERKEEAKNTASFSASDVG
SGLTTSLNQGEEIVSTQKIEESAQQVNQNIITPKESDKGKKSPKNNLTGKRKVKVDWTPE
LHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRRHLLAREAEAASW
SHRRQLYGGAAAVEGGGGKREMNPWPAPTIGFPPPLPPRMAPPMPHHFRPLHVWGHPSVD
QSYIHMWPKHLASSPSPQHPSPAWAPPLHLHPSPPSDPSFWHPHHQQVPNSLTPGTPYFT
APIAPTRYPAAHHPVPGIPPGTSHGMYKVDHSGMSVQSTATPPQSLPKPPCDFHPSKESV
DAAIGDVLSKPWLPLPLGLKPPAVDSVLGELQRQGVPKIPPACA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtgtcaccttttagtagcacaacggtgagagatgaaagggataacgagatg
gaaagttttgcgatgggaggaggaggaggtggaggagatgattttcccgatttcatggga
gagaatttactcgatagcattgattttgatgacctttttgttggaatcaacgacggagat
gtactacctgatttggaaatggacaatgagattcttgctgatttttcagttagtagtggc
gacgaatccgatgtgaacaattatagcacaagtaatacttttattactactgctataaaa
aatgtagaaagaaaagaagaagcgaaaaacacagcttcgttttcagcctcggacgttggt
tcgggtttaacaacgagcctaaatcaaggagaagaaattgtgagtactcaaaaaattgaa
gaatctgcgcaacaagtgaatcagaatataattaccccaaaagaaagtgataaaggcaaa
aagtcacccaagaataatcttacaggcaagaggaaagtaaaggtggactggacgccagaa
ttacacagaagatttgtacaagcagtagagcagctaggtgtagataaggcagtcccatca
agaattttggagattatgggaatcgattgtctcactcgtcataatattgccagtcatctt
caaaaatatcggtcccataggagacatttgcttgcgagagaagcggaggcggcaagttgg
agccacagaaggcaactctacgggggtgcagccgcggttgaagggggcggaggaaagaga
gagatgaacccgtggccagcaccaacaattggatttccacctcctcttccgccccgtatg
gcacctccaatgcctcatcatttcagacccttacatgtatggggtcatccatccgtcgac
caatcatatatacacatgtggcctaaacatctagcatcttcgccgtctccgcaacatcca
tcaccagcatgggctcctcctcttcatcttcatccttcaccaccttcagatccttcattt
tggcatccacaccatcaacaggtaccaaattctcttacaccaggaactccttactttaca
gcacccatagcaccaacgagatatccggctgctcatcatcccgtaccaggcataccaccc
ggaacatcgcatggcatgtacaaagtagaccactctggcatgagcgttcaaagtactgct
actccaccacaatctttacctaaacctccttgcgactttcatccgtcaaaggagagcgta
gatgcggccattggagatgttttatcaaaaccatggctgccacttcccctcggactcaaa
cctcccgccgtggacagcgtgctgggagaattacaacgtcaaggggtacctaaaatacca
ccagcttgtgcatag
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