Solanum dulcamara (climbing nightshade): 129892273
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Entry
129892273 CDS
T09577
Name
(RefSeq) auxin response factor 6-like isoform X1
KO
K14486
auxin response factor
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129892273
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
TFIIA
Motif
Other DBs
NCBI-GeneID:
129892273
NCBI-ProteinID:
XP_055823811
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Position
6:14925950..14934604
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AA seq
894 aa
AA seq
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MRVSSSGFNPQPEEAAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN
KEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELG
IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEW
KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPS
SVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMR
FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE
PLTTFPMYPSPFSLRLKRPWPSGLPSLPGFPNGDMTMNSQLSWLRGDMGDQGMQSLNFQG
FGVTPFMQPRMDASMLGLQPDILQTMAALDPSKLANQSLMQFQHSIPNSSASLSQSQMLQ
PSHSQQNLIQGFSENHLISQAQMLQQQLQRRQNYNDQQHLLQPQLQQHQEVNSQFQHQQQ
TKAISSLSQMASATQPQLSHLQVLSSTGSQQIFSDILGNHVNASSNSNMQSLLSSFSRDG
ASSVLNMHETHPLVSSSSSSKRIALESQPPSRVTPFVVSQPEDVIAHNTKVSDLSSLLPP
FPGRESFSDYRGVEDSQSNALYGFTDSLNILQTGMSNMKGSSGDNGSLSIPYATSTFTST
VGNEYPLNSDMTTSSCVDESGFLQSSENGDQGNPNNRTFVKVHKSGSFGRSLDISKFSSY
HELRSELARMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQEFVNNVWHIKILSPH
EVHQMGKEGLDLPNGVQAQMLPGNVNVCDDYMNQKGSRNTMNRIPLGSLDYYDH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagggtatcttcatctgggttcaatcctcagccagaggaagcagcaggggagaagaaa
tgcttgaattcagagctgtggcacgcgtgtgcaggaccactagtttcacttccacctgta
ggaagcagagtggtgtattttcctcaagggcatagtgagcaggttgctgcctcgaccaac
aaggaagtagatgctcatatccctaattatcctggtttaccgcctcaattaatttgtcag
cttcacaacctgacaatgcatgcagatgttgagactgatgaagtatatgctcaaatgaca
ttgcagccactaagtccacaagagcagaaggatgtgtgcctgctaccagcagaacttggc
atcccgagtaaacaaccaactaactatttctgcaaaactttgacggcaagtgataccagt
actcatggtggattctctgtccctcgccgagcggcagaaaaagttttcccccctcttgat
tactctcagcagccaccctgtcaagaattgattgcaaaagatctccatgggaatgaatgg
aaattccggcatatttttcgcggacaaccaaagaggcatctattgacaacaggatggagt
gtgtttgtgagtgcaaagagacttgttgcaggcgatgcagttatctttatctggaacgaa
aacaatcagttgcttttggggattcgacgtgctaatcgtcctcaaactgtcatgccttct
tcagtgttgtcaagtgatagcatgcacattggtctcctagctgcagcggctcatgcagct
gcaactaatagccgctttacaatattttataatccaagggctagcccatcagagtttgtc
atacctcttgccaagtatgctaaagcagtgtatcatactcgaatttctgttggtatgagg
ttccggatgctgtttgaaacagaagaatcgagtgtccgtaggtacatgggtacaattact
ggcatcagtgatttagatcctgttcgttggccaaattcacactggcggtccgtgaaggtc
ggatgggatgaatcaactgcaggagagaggcagcccagagtttctctgtgggaaattgaa
cctctgacaactttccctatgtatccttctcctttctcccttaggctaaagcgaccttgg
ccatctggactaccttctctccctggtttccctaatggtgatatgactatgaattctcaa
ctctcatggctgcgtggtgacatgggtgatcaggggatgcagtcgcttaatttccaggga
tttggggttactccatttatgcaaccaagaatggatgcttctatgttaggtttgcaacct
gacattctgcaaacaatggcagcactagatccatcgaaacttgcaaatcaatcccttatg
cagttccaacatagtattcctaacagttcagcgtctttgagtcagagtcagatgttgcag
ccttctcattcacagcaaaatctgatccaaggcttctcagaaaaccacttaatatctcag
gcgcagatgcttcagcaacaattgcagcggcgtcaaaattataatgatcaacagcacttg
ctgcagccacagcttcagcagcatcaagaagtgaactcgcagtttcaacatcaacagcaa
accaaggcgatctccagtctctctcagatggcttcggctacgcagccccagctttctcat
ttgcaagtcttaagttcgactggttcccaacaaatcttttctgatatactgggtaaccat
gtcaatgcatctagtaattctaatatgcaaagtctgttgagttcattttcccgtgatgga
gcatcttctgtcctgaacatgcatgaaactcaccctctagtgtcttcgtcctcatcatca
aagcgaattgccctagaatctcagcccccttctcgggttactccatttgttgtgtctcag
cctgaggatgtgatagcgcacaatactaaggtctcagatctttcctctttgctgccacct
tttcctggcagggaatctttttctgattatagaggagtagaagatagccaaagcaacgca
ctctatggatttaccgactctttgaacatactgcagaccggtatgtccaacatgaagggt
agtagtggtgataatggatctttatctattccttatgctacctctaccttcacaagtaca
gtgggcaatgagtatccccttaactcagacatgacaacgtcaagttgtgtagatgaatca
ggtttcttgcagtcctcagaaaatggggaccaaggaaacccaaataatagaacctttgtg
aaggttcacaaatcagggtcctttggacggtcactcgatatctccaaatttagcagctat
cacgaacttcgaagtgagcttgctcgcatgtttgggctagaaggcttgttggaggaccct
gagagatcaggctggcagcttgtaattgttgaccgagagaatgatgtcctcctcctcggt
gacgatccttggcaggagtttgtgaacaatgtttggcatatcaagatactttctccacat
gaggtgcaccagatggggaaagagggccttgatcttccaaatggcgtccaagcgcagatg
cttcctggcaatgtcaatgtatgtgatgactatatgaatcagaagggctcccgaaatact
atgaacaggataccgttggggtcacttgactactatgaccattag
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