Solanum dulcamara (climbing nightshade): 129892372
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Entry
129892372 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129892372
KO
K20283
golgin subfamily A member 4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129892372
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129892372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
WIT1_2_N
ATG17_like
FKBP15
Tropomyosin
Rod_CreS
Sec10_N
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
129892372
NCBI-ProteinID:
XP_055823914
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All DBs
Position
6:complement(16487654..16497685)
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AA seq
1318 aa
AA seq
DB search
MEAETATTDVPVVQVSEKIEGKGDVIKGSNGKIEGQKEHEESAFDGEFIKVEKEALESKD
GSHAIAEASPAEGKVSAMERSSNISSASREYLEAQEKANELELELERFAGSLKDTESQNV
KLKDELSLTKEKLEETAKKFEDLELDHKKLKEQIAEAENRYSTELNALQEALHTQELNNK
ENVNVKEAFDRLGLEFESSKKKMEELEQKLLASASEAQKFEELHKQSGSLAESETKRALD
FERLLELSKQNAKEIEDQMASLQEELKSLNEKIAENQKVEEALMTTASELSKVQGELEIS
KSQVQEIENKLASKEALIDEFSQELDTRKASESQVKENISSLELLLSSTKEDLQAKVSEL
EDIKLKLQEEVGLKEHIEAELKNQETQLSVSQEELDKLSTEKGALEAAVAELNNNVVQIK
ELCSDLEVKLQLSDKKFCNADSLLSQALANSTELEQKLKSLEELHLESSNAITTANQKNV
ELEDMLQISNASLEEAKSQLREMENRCAAAEERSVELERQINLAELKSNDVKRELEEFSG
KVSELNATLEKTVEERKQLDTRLQEYEEKIAHLDSELVKSSARNLELEAELKNVADKCAE
HEGRANTKDQRSRELEDLMLVSHSKVEEAGKKASDLELLLETEKYRIQELEEQISTLEKK
CVAAEAECKKHSDRVSELEAEVETFQTKSSSLEVAMAETKEKEKELSQCLNNVTEEKRNL
EDVYKNSIEKLAEAESLLEVLRHELNTTQQKLEGIENDLNATGLRESEVMEKLKSAEEQL
EQQGRVLEQATARSIELESLHDTLKMDSELKLQEATGKFVTRDSEAQTLNEKLKSLEDQL
KSYEEQIGKSAESFSAVKEELDQVLVKLASSETDNEDLKKKILEAEDKAADILSENQQLM
ETNMLLKNRVNDLEEMLNSAHAEKEESVQQLVSHMNTITELTDQHSRASELQSATEARIS
ETEAKLQEAIQKSTQKESEGKELMDKLHSLEALVKTYEEQTHETVTLAETQKMELEQSCK
NLSHLESIVEELKGKCTELEKEKEGLTQENSELKGEVASNDSKLNDLEAKVSAAFAEKNE
AVEELKASNQVIDNLKEQLSSEGQKLQLQLSSILEENNLLNETHQTCKKEQQNVIAHLEE
QLKEIKSSENSLKSQLELFQAEIHQKSQLQSRIKELEDHLGSAEAQAKEEKEAMSNKGLE
QEATLKSSSEELQAKSKEVVTLQNQVKELEEKLKQKDIGGGSSDQKDEVEVKSRDIGQMF
STPTKRKSKKKSEVSSTQPSSSESQVQHIEGSAALSLKFILGVALISVILGIILGKRY
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagagacagcaaccacagatgtaccggtggtacaggtttcagaaaagatagag
ggcaaaggcgatgttattaaggggtccaatggcaagatagaaggtcagaaggagcacgaa
gagtctgcttttgacggagagtttataaaagtagagaaggaagctttggaatcaaaggat
ggttcacatgctatagctgaagcttctcctgcagagggcaaagtgtctgcaatggagcgt
agctcaaatatttcatctgctagcagagaatatcttgaagcacaagaaaaggctaacgaa
cttgagcttgaattggaaagatttgctggatcattaaaagacactgaatctcaaaatgtg
aagttaaaggatgaattgtcgctcacaaaagagaagctggaggaaactgcaaagaaattt
gaagaccttgaacttgatcacaagaaattgaaagagcagattgcagaagcagaaaataga
tatagcactgagcttaatgctttgcaagaggcattgcatactcaagaattgaataacaag
gagaatgttaatgttaaggaggcatttgacagacttggcctcgagtttgaaagctcaaag
aagaagatggaagaacttgagcaaaagctgctggcttcggccagtgaggctcaaaagttt
gaggagttgcacaaacaaagtggctcacttgcagaatcagagacaaagagggccttggat
tttgagagattgctggagttgtcgaaacagaatgcaaaagaaattgaagaccagatggct
tctttacaagaagaactcaagagcctaaatgagaagattgctgaaaatcagaaggttgaa
gaagcactcatgaccacagcttcagagctttctaaagttcaaggagagttagagatctca
aaatcacaagtgcaagagattgagaataaacttgcatcaaaagaagctctgatagatgaa
tttagccaagagcttgacacgagaaaagcttctgaatctcaggtaaaggagaatatttcg
tctcttgagcttttgttatcatccacgaaagaagatcttcaggctaaggtatctgagttg
gaagacataaagttgaagcttcaggaggaagtaggtttgaaggaacacattgaagctgaa
ctgaaaaaccaggaaacacaactctcagtgtcgcaggaggagctggacaaactatctaca
gagaaaggagctcttgaagctgctgtagccgagctaaacaataatgtggtccagattaag
gaattatgtagtgatctagaggtgaaattgcagctttcagataagaaattctgcaatgca
gattctcttctttctcaagctttagcaaacagcacggagctggagcagaagctgaaatca
ttggaagagcttcaccttgaatcttcaaatgccataactacagccaaccagaaaaatgtt
gaacttgaggacatgctacaaatatccaatgcttctttagaagaagcaaaatcgcagctt
agagaaatggagaatcgctgtgctgcagctgaagaaaggagtgtggagctagaacggcaa
ataaatctggcggaactgaaaagcaatgatgtgaagagggaactagaagagttctctggg
aaagtttctgaactaaatgccacgcttgagaagactgtggaagaaaggaaacagctggat
accagattgcaggagtacgaggagaagatagctcatttggattctgagttggtcaaatca
agtgctcgtaatttagaacttgaagcagagcttaaaaatgttgctgataaatgcgctgag
catgaaggtcgggccaataccaaggatcaacgcagccgtgaattagaggacttgatgctg
gtatcacactcgaaagtagaggaagctggcaaaaaggcgagtgacttggagctattgctc
gaaacggagaaatataggattcaggagcttgaagaacaaataagtacattagagaagaaa
tgtgtggctgcagaagcagaatgtaagaagcactctgacagggtatctgagcttgaagca
gaagtagagacattccaaacaaaatcgtcaagccttgaggttgctatggcagagaccaag
gagaaagagaaggaattgagtcaatgtctcaacaatgtgacagaggagaagagaaactta
gaggatgtctacaagaattcaattgaaaaactagctgaagcagaaagcttgcttgaggtc
ctgcgtcatgaattgaacaccacacaacagaaactggaaggtattgagaatgatcttaat
gctactgggttgagagagagtgaggtgatggagaagctcaagtcagcagaagagcagcta
gagcaacaaggaagagttttggagcaagcaacagctcgaagcatagagcttgagtcattg
catgatactctgaagatggattccgagctcaaactccaagaggcaactggaaaatttgtt
accagagattcagaggcacaaacattgaatgagaaactgaagtctcttgaagatcagcta
aagagttatgaggagcagattggtaaatctgctgaaagcttttcagctgtgaaggaagaa
ctggatcaggtgttggtgaagctggcttcatctgagactgacaatgaggacctgaaaaag
aaaatattggaggcagaagataaagctgcagacattttatctgaaaaccaacaattaatg
gagacaaatatgcttcttaagaacagggtgaatgatctggaagaaatgttaaactcagcc
catgcagaaaaggaggaaagtgttcaacaactagtttctcatatgaacaccatcacagaa
ctgacagaccagcattccagagcgtctgaacttcaatcggcaactgaagcccgcatatca
gaaacggaggcaaagctgcaagaagccattcaaaagtccacccagaaagagtctgaaggt
aaagagttgatggataaactacactctcttgaagctctggtgaaaacatatgaagagcag
actcatgaaacagttactctggctgaaactcaaaagatggaactagagcaaagctgcaag
aatttgagtcatcttgaaagcattgttgaagagctgaaggggaagtgtaccgaacttgaa
aaggagaaagaaggactaactcaagagaactcagagctaaagggagaagtggcctcaaat
gactctaaactcaatgatttagaagccaaagtgtcagctgcatttgccgagaagaatgaa
gcagttgaagagcttaaagcttcaaaccaggtgatagacaacttaaaagagcagcttagt
tctgaaggacaaaagctacaacttcagttatcatccatattggaggaaaacaacttgctc
aatgaaacacatcaaacctgtaagaaggagcagcaaaatgtcatagcacatcttgaagaa
cagttgaaagaaatcaagtcaagtgaaaattctctgaaaagtcaattagaacttttccag
gctgagattcatcagaagtctcagttgcaaagccgcatcaaggagcttgaagatcactta
ggtagtgctgaagcgcaagcaaaagaagagaaagaggctatgtccaataaggggttagag
caggaggcaactttgaagagttcatcagaggaactgcaagccaaaagcaaggaagtagtt
actctacaaaaccaagtcaaggaacttgaggagaaattgaagcagaaggatattggtggc
ggtagtagtgatcaaaaggatgaggtagaggtaaaatctagggacattggacaaatgttc
tctactccaacgaaacgaaagagcaagaagaagtccgaagtctcttcaactcaaccatcc
tccagtgagtcacaagttcaacacattgaaggatctgctgctctgtccctgaaatttatt
ttgggggttgctctaatttcagtcatcctgggaataattcttggtaaaagatattag
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