Solanum dulcamara (climbing nightshade): 129892617
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Entry
129892617 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129892617
KO
K14794
ribosomal RNA-processing protein 12
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129892617
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
90S particles
Other 90S particles
129892617
Pre-60S particles
Other pre-60S particles
129892617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_Maestro
MMS19_N
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
129892617
NCBI-ProteinID:
XP_055824175
LinkDB
All DBs
Position
6:20129269..20144172
Genome browser
AA seq
1295 aa
AA seq
DB search
MEGIEMEDPFLENSSDDFCNTVLSQFCESNNEHHVHICTAIGTMSQELRDQSFPLTPIAY
FGATFSSLQTLYTAAPEGPPSHLIDALSTIFSLVIPRINQAILKKKYEYLSDVMIQLLGL
KTVGTEGIVSCFKCVVHLLIVGAKGNWTDVAQLYGVFIGYITDDRQKVRKMSHNCLRDLL
QNFQSSSVLAPLLAPASEAITNLFERSLLLAGGTTVCASERPKGAQEVLHVLDALKLCLP
FMSSKYLNSTLKYFKSLLELHQPLVNRRITDGLNALCIHPTAEVSPEVLLDLLGSFATSV
SANESSADTLTFTARLLGIGMRKVYSINRQLCVVKLPVVFNSLSDVLGSEHEEAIRAALE
ALKSLIHECIDENLIKQGVDNIISSNTDMKKSGPTIIEKICATIESLLTYHYAAVWDMSF
QVVVAMLDKLGCYSSHLLKGTLQSLAEMEKLPDEDFPYRRQLHECVGSAVGAMGPESFLT
LLPLKLDAQDLSESNIWLFPILKQNIVGAHLSFFTNSILSMIGAMKQKSARLEREGKIYS
ARTIDGIVYSLWSLLPSFCNYPVDTAESFKDLEKVFRKALHEEPDVCGILCSSLQILIQQ
NDNILKGKVDLSDTETSVPRERAIARYNQQVADNNLNSLSLSAQKLLPVLYDVFLKSSKD
NGGFLQRTIGVLASIADKVREKSLDKAEGKKRVVRVLFTKIMQRLLEVTQEVGEAEKDKK
SYSMQIDDSSSKSSLSERAQLFDLAVSFLPGLNAQEIGVLFGALKPALKDEEGLIQKKAY
KVLSMILQDCDEFISTKMEELLNLMIEALPACRFPAKRHRLDCLYYLIVHVTKDESEQRR
RDSITSFMTEILLALKEANKKTRNRAYEILVKIGHACADEDKGGRKENLHQFFNMIAGGL
AGETPHMISAAVKGLARLAYEFSDLVSAAYSVLPSTFLLLKRENKEIIKANLGLLKVLVT
KSTADGLQTHLRSMVEALLGWQNSTKNHFKAKVKLLIEMLIKKCGLDAVKEVMPEEHMKL
LTNIRKIKERRDRNLASNSAESRSRMTKATTSRQSRWNHTKIFSEFDDGESENSDAEYMD
TKTTAGRRSKATLVSDAKASLLRSKKTWKAAKSLQEDLFDQLDDEPLDLLDQKKTRSALR
ASGNLKRKPESEDEAEIDSEGRLIIHEGEKKQKRDKPPTDDLDVRSKAGSRFSKSSRKTE
KRRKTSDSGWAYTGTEYASKKAGGDVKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMS
SIVKLTKKLEGKSASSVLSAKRSKTTKKTRSKIEG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggaagggattgaaatggaagatccattcctggaaaactcctcagatgacttctgcaat
actgtattatcacaattttgcgaatcaaacaatgagcaccacgttcacatctgcaccgcc
attggtacaatgtcacaggagctcagagaccagagttttcctcttacgccaattgcttac
ttcggtgctactttctcctcacttcaaaccctatataccgctgcccctgaaggaccgcca
tcccaccttattgatgctctttccactattttctctctcgttattcctagaataaaccaa
gctattttgaagaagaaatatgaatatttatctgatgttatgattcaacttcttggatta
aagactgttggtaccgaggggattgtttcgtgcttcaagtgtgttgtgcatttgctaatt
gtgggagccaaggggaactggactgatgttgctcaactttatggtgtgtttattgggtat
ataacagacgatcggcaaaaggtgaggaagatgtcacataattgtcttcgtgatctccta
caaaactttcagtcatcatctgtgcttgctcctctattggcacctgcaagtgaagcaatc
acaaatctctttgaaaggtcgcttctacttgcaggaggaacaactgtatgtgcctctgaa
agacccaaaggagcacaagaagtcttacatgtgctggatgctctgaaactttgtcttcct
tttatgtcttcaaagtacttgaatagcactttgaagtacttcaaatctttattggaattg
catcagcctcttgttaataggcgcattacagatggtttgaatgctctttgtatccatcca
acagcagaagtatccccagaagtgcttttggacctcttgggttcatttgctacttcagtt
tctgcaaatgagtcatctgctgatactttgacattcacagctcgcttgcttggcattggg
atgagaaaagtatattcaattaacaggcagttatgtgtggttaagctccctgtggtgttc
aactctctaagtgatgtactgggttctgaacatgaggaagctataagggctgcgctagag
gcactcaagagcttaatacatgaatgcattgatgaaaacttgatcaaacagggtgtggat
aacataattagttcgaatactgatatgaaaaaatctggaccaactatcattgagaaaatc
tgtgccacaattgagagcttgcttacttatcactatgcagcagtctgggacatgtcattt
caagtggtggttgccatgcttgataagctaggttgctattcttctcaccttctgaaggga
acacttcagagtttggctgaaatggaaaagttgccagatgaagactttccttaccgtaga
cagctgcatgaatgtgttggatcagctgttggtgcaatgggacctgaatcttttcttact
cttcttcctcttaaactggatgcacaagatctatcagagtccaacatctggcttttccca
attctaaagcaaaacattgttggtgcgcatttaagtttctttaccaactcaattttgtcg
atgattggagctatgaagcagaagtctgcaaggcttgagcgtgagggaaagatatattca
gcgagaactattgatggaattgtgtactcattgtggtcactgttaccctcattttgcaat
taccctgtggacactgctgaaagcttcaaggatctggagaaggtattccgcaaagctcta
catgaagagcctgatgtttgtgggatactatgctccagtttgcagatcctcattcagcag
aacgataacattttaaaagggaaagtggatttgtctgatactgaaacaagtgttcccaga
gaacgagccattgcacgttacaaccagcaagttgcagacaataacttgaactcattgagc
ctttctgctcagaaactgctgcctgttctctatgatgtcttcttgaaatcctctaaagat
aatggtggatttttgcagagaacaattggtgtattggcctctattgctgacaaagtgaga
gaaaagagtctcgacaaagccgaaggaaaaaaaagggtggtaagagtgctttttacaaaa
atcatgcagaggcttttggaggtgacccaagaagttggggaggcagagaaggacaaaaag
tcctattcaatgcagattgatgactcatccagtaaaagttctttgtcagagagggcacag
ttatttgatctagcagtttcattcttgcctggtttaaatgctcaagaaattggtgtgctg
tttggtgctttaaagcctgctttaaaggatgaggaaggcttgatccagaagaaggcatat
aaagttctctccatgatccttcaggactgtgatgaatttatttcaacgaagatggaagag
ttacttaatttgatgattgaagcactacctgcatgtcgttttccagccaagcgtcacagg
cttgactgcctatactatttaattgtccatgttacaaaggatgaatcagaacagaggagg
cgtgacagtattacttcttttatgactgaaattttgcttgcactcaaagaggctaacaag
aaaacaaggaaccgggcttacgagattcttgtcaagattggccatgcttgtgcagatgaa
gacaaaggtggcagaaaggagaacctgcatcagttttttaatatgattgctgggggtctt
gccggggaaacacctcatatgatcagtgcagcggttaaaggcctagctcgcctggcttat
gaattttcagaccttgtttctgctgcttacagtgtcctaccatcaacatttcttctccta
aagagagagaacaaagaaataattaaggctaatttagggctgttgaaggtactagtcaca
aaatcgacggccgatggattgcaaacacatttaaggagcatggtagaggcccttcttggt
tggcaaaatagtaccaagaaccatttcaaagccaaggttaagctgcttattgaaatgctt
atcaagaagtgtggattggatgctgtaaaagaggtgatgcctgaagagcacatgaaactc
cttactaacataagaaagatcaaggagcgaagagataggaacctcgcctcgaattccgct
gaaagcagatcccgtatgacaaaagcaacaacatcaaggcaaagcagatggaatcacacg
aaaatcttttctgagtttgatgatggagaatctgagaatagtgatgcagaatatatggac
acaaaaactactgctggtcgtaggagcaaggctacattagtatcagacgccaaagcatct
ttattacggtccaagaaaacatggaaagcagccaagagtttgcaggaagatctgtttgat
caattagatgatgagccacttgacttacttgaccagaagaagaccaggtcagctcttaga
gcatctggcaatctcaagaggaagcctgaatcagaagatgaagcagaaatagactctgaa
ggccgtttgattattcacgagggagagaagaagcaaaaacgagacaagccacctactgac
gatttggatgtaagaagcaaagcagggagtcgcttttcaaagagctcaaggaaaactgag
aaacggaggaaaacatctgattcaggatgggcctatactggaacagagtatgcaagcaag
aaggcaggtggtgatgtcaagaggaaagacaaacttgagccgtatgcctactggcccctt
gaccgcaagatgatgagccggaggcctgaacatcgggcagcagcacgaaaaggaatgtca
agcattgtgaagctaacaaagaaacttgaaggcaagagtgcatcatctgtgctgtccgca
aagagatctaagacaacaaagaaaaccagatcaaaaatagaaggatga
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