Solanum dulcamara (climbing nightshade): 129893228
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Entry
129893228 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129893228
KO
K15082
DNA repair protein RAD7
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129893228
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
129893228
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_At1g61320_AtMIF1
LRR_NXF1-5
GlfT2_domain3
Motif
Other DBs
NCBI-GeneID:
129893228
NCBI-ProteinID:
XP_055824704
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Position
6:complement(24494491..24500257)
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AA seq
881 aa
AA seq
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MTLLRSREVTPAASKAKVSSETLENHVLEPATPSKSLETSVQPLCDVTPTSPSSASRDIP
RVATRRSLRLASKNGLSEIGEISSNRGKCKDFEIDNGYTGKSLKSDVGVESVALDEDDKD
FGVLHNESDDIENSACSEERIEYVKKGKGDKRTRMEVQGEGDTKFLSLRSGKKISKRAVE
ECSGGSVGDTGSVQNDCDEKLSHGKLSEGMLNSCGSDGSSHKLWTSSVKPSSVKRRRFSR
EEKSKGPVSEQSLPVVHSLKLESAVASGISFENTVPQSACLPETVDLAVQGDGQAATLQI
RDSKTRRLSREEKGKKVMAVYELRHAVDTVQGKSKHRAEKLVDEIVSRAINLTIQDGEQV
ADTDGSATATRRVHRERFRDIARRNASRFAHFSSQAEQETNVADEAAEEIPQEVMENEEI
EDWPGPFSTAMKIIRDRETNIKHQQQSKSEKSKIEVVWVPKKNQQCQSRKLVVPSLQDLC
MGILVKNADAITSLDCVPDALRHKICQSLCDSREMTYQFFELLIRGSPTEIRIRDCSWLN
EEKFTQSFEGCDTNNLVVLQLDQCGRCMPDYILLVTLARCPNNLPALTTLSLKGACRLSD
AGLKVIISAAPNLRSMNLSQCSLLTCDGISCLSNSLGSVLRELYLDNCEAIDPMLILPAL
LKLEHLEVLSVAGIQTVCDAFIKEFVTHRGQSLREIVLKGCMELTDCSLKDISQNCPGLR
AIDLSDLCKLTDSAIGHLATGCREVDNLKFCRNAFSDEAVAAYVETSGASLKELSLNCVN
KVSHNTAMSLAKCSKNLINLDLSWCRNLTNEALGLIVDNCLSLEVLKLFGCSQVTSVFLD
GHSNSQVQIIGLKGTPILQCIEAPDSLKLGPLRYSALPSLV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttttaaggtctcgcgaggtgactccggccgcatctaaggctaaagtctcttct
gaaaccctagaaaatcatgtattggaaccggcaactccatcgaaatctcttgagacttcc
gtacagcctttatgtgacgtgactcccacttctccttcttcggctagtcgtgacattcct
cgtgttgctacaagaaggagtttgagattggcttctaaaaatggtttgagcgaaattggc
gaaatttcgagtaatagaggaaagtgtaaggattttgaaattgataatgggtatactggc
aagagcttgaagagtgacgttggtgtagaaagtgtggctttggatgaagatgataaggat
tttggggttttacataatgaatctgatgatatagaaaattcagcctgcagtgaggaaaga
attgaatatgttaaaaaggggaaaggggataaaaggacaagaatggaagtgcagggagaa
ggggacactaagtttttgagtttgcggtcaggaaagaaaatctctaagagagcagttgaa
gaatgcagtggtggctctgtcggcgatactggaagtgttcagaatgattgtgatgagaag
ttgtctcatggaaagctaagtgaaggaatgttaaacagttgcggttcagatggctccagc
cataagttatggacaagttcagttaaaccttctagtgttaagaggaggagattcagcaga
gaagagaaatctaaaggtccagtttctgaacagagtttgccagtggttcattcactgaaa
ttggaatcagcggtagcatctgggatttcatttgagaacacggtacctcagtctgcctgt
ttgccagaaaccgtagatctggctgttcagggtgatggacaagctgccactttgcaaatt
cgtgattcaaagacaaggaggcttagtagagaggaaaagggaaaaaaagtgatggctgtc
tatgagttgcgtcatgctgttgatacagtgcaaggaaaatccaagcacagggcagagaaa
ctcgttgatgaaatcgtttcaagagctattaatttgacaattcaggatggagagcaagtt
gcagataccgatggcagtgcaactgctacaagaagagttcatagagaaaggtttagggat
attgctaggcgaaatgcttccaggtttgcccatttctcctctcaagcggaacaggagacc
aatgtcgctgatgaggctgctgaggaaattccacaggaggtaatggagaacgaagaaata
gaagactggcctggtccattttcaactgctatgaagattattagagatcgtgaaacaaac
atcaagcatcagcagcagagtaaatctgagaaaagtaagattgaagtggtatgggttccc
aaaaagaaccagcagtgccaatctagaaagctggtggttccctcactacaagacctatgc
atgggcattttagtgaagaatgcagatgcaatcacttcacttgattgtgtacctgatgca
cttaggcacaagatatgccagtcactgtgcgactctcgggaaatgacgtatcaatttttt
gaacttcttatccgtggatctcctacagagatacgcataagggattgttcatggttgaac
gaggagaagttcacacagagctttgaaggatgcgacaccaacaacttggtggtgcttcaa
ctggatcagtgtggtcgctgtatgccagattatatcctattggttacattagctcgttgt
ccaaacaatctccctgcattgacgaccttatccttgaaaggtgcatgtcgtctttcggat
gctgggctgaaggtgatcatctccgcagcacctaatttaaggtcaatgaatcttagccag
tgctctttgctgacatgtgatggaattagctgtttatctaattcattgggatcagttctg
agagagttatatctagacaattgtgaagcaatagatcccatgcttattctgccagcattg
ctaaagctagaacatttggaagttctatcagtagctggaatccagactgtgtgtgatgct
tttattaaagaatttgtcactcatcgaggtcagagtctgagagagattgttctgaaggga
tgcatggaattgactgactgttctctgaaagatatttcacaaaactgtcctggattgcgc
gctatagacctgagtgacttgtgtaaattgacagactctgcaattggacatcttgccact
ggttgtagagaagttgataatctcaaattctgtcgcaatgcattcagtgatgaagctgtt
gctgcttatgtggagactagtggggcgtctttgaaggaactgtctctcaattgtgtcaat
aaggtttcacacaacactgcaatgtctctagccaaatgttcaaaaaatttgatcaatctg
gatttgtcttggtgccgcaacttgacaaatgaagccttgggattgattgttgataactgc
ttatcgttggaagtactaaaattgtttggctgttctcaggttactagtgtttttctggat
gggcactcaaattcccaagttcagatcattggattgaaggggactccgatactacagtgc
attgaggcaccagattctctgaagctggggccgctacgatattcagcattaccatcttta
gtatga
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