Solanum dulcamara (climbing nightshade): 129893250
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Entry
129893250 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129893250
Organism
sdul
Solanum dulcamara (climbing nightshade)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
zf-HC5HC2H
AAA_lid_3
zf-HC5HC2H_2
AAA_16
NPHP3_N
nSTAND3
PHDvar_NSD
AAA_2
AAA_30
AAA_14
Motif
Other DBs
NCBI-GeneID:
129893250
NCBI-ProteinID:
XP_055824735
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Position
6:complement(2798132..2806446)
Genome browser
AA seq
1820 aa
AA seq
DB search
MRLSRIASVARRRTDTKLVYSRARKKHKRLDEVCEETYNQNHNGVEKVETSEWNGEESDV
ELRRSSRVRKAPVVLDASPPPPRKRQKIDRRSEVSSCSRVEKGDVVKLESPCSTSKDLEE
GTSAWGLRLRARSKRRTNRVRNSVNLSPVGKRKLFQDVDGLKEETELEVGEVDKEEDSEC
EKSTIVKSKRPGRIKASNVMVTEQQETDAGGGVEAGKMINQEELLQVRDGTDDGISMTGF
KEGVEDGNAAFPLVNKDKARLETCVVPEECHATNQVSMLEQDLQSKNELSIGVNDQKDAV
EVGLLANGEKDGGTEKQAEDGVDRVDYAQEKDEGVFSDKALEMVKLVKKECASDNTLRKW
RIREGRRCGLCGGGTDGKPPKKLVYGAASDDEAHSGSSASDEPNYDMWDGFGDEPGWLGR
LLGPINDRYGIAGIWVHQQCAVWSPEVYFAGLGCLKNVRAALCRGRVLKCSRCGRPGATI
GCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPYGSNYLQRIKKLKARKMKF
ELRKLSNDALRKDVDAEEKWLENCGEDEEFLKRESKRLHRDLLRIAPVYIGGSNSDAGIQ
FQGWDSVAGLQDVIQCMKEVVILPLLYPELFSSLGLTPPRGVLLHGYPGTGKTLIVRALI
GSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKSQPSVIFFDEIDGLAPCRG
RQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSV
KDRESILSLHTKKWPKPVSGPVLKWIAIKTVGFAGADLQALCTQAAIIALKRSFPLHKRL
SAVVKVPNAACPPLPNFKVEERDWVEALTCAPPPCSRREAGMAANDVVSAPLHIFLVPCL
LQPLSRLLVSLYLDERLWLPPLLFKAAEFVKDVVLSAMIEKKLPSNNWQSYVNNLLHEPD
VISQIENHFIRANILVGDANIGSFDAVDDDIVHGLSNSQPSKLQWAGARPKLLKNIFHMP
GKKSGFRILISGNPRSGQRHLASSLLHCFVGNVDVQKVDLATISQEGHGDVIQGLTQILM
RCASVEKCMIFMPRVDLWAMDTSDPVCQEDGCSLVNPESLGKDEERSFNHSGDQAGDALK
RASYLWSSFVEQVESICMATSVMLLATSDVPLEALPVRVRQFFKSQALNSSIPFPLEDSV
SRFTEQLDRNFDQECLIDSSAAKLSKDLAQHFIQLIHRTNHVHLHTCNDEASDKPEGDVA
IECQRLDLRSTIEHVNKQCPLPTSAIVNSRNVKGKSNLMLAITTFGYQILRYPHFAELCW
FTSKLREGPCADIDGPWKGWPFNSCVIRPINSTVNVALPSNNSKGKEKYCMVRGLIAIGL
LAYRGKYSSVREVSAEVRKVLELLVQQINDKIRNGKDRYQFVRLLSQVAYLDDMVNSWVY
SLQSLGGDTQLSEANPKIGCVGLPESANVPENTLLREGGCELEESLDKAETLETCQPELT
AENCMRVNPEANGFSNFPDIGTEEHESPHLVAVNHSAPSRQVTRSVHSVLNHNSCMRDDT
DKHLESIGDCVSKRQSNGRMELNIDDVQEDGSSYSNDRCGIEHSNYTLSSSSNGILSTLN
NLQIRDSNKKSVGSSVGLECSNISSNVATDSSLVCLYRCCPQCLLNLQRTLKKMLSYEWE
LKKAEFIVEDAYDFLASLAANLHSALRVWLLADDSTSFDEKRVRVQERYSESFECKETNL
CECRNLENRLIKLIECNCHLKSSVKTEKCKSSQNLHQEFIFRDGVLTNLEDKDVSTHCKF
ETLCLCSLVEWIVMRKNPLY
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgtcgcggatagcgtcggttgccaggagaaggacggatacgaaattggtatat
tctagggctaggaagaaacacaaaagactagatgaagtttgtgaagaaacatataatcag
aaccataatggtgttgaaaaagttgaaacgagtgagtggaatggtgaggagagtgacgtt
gagcttcggaggagctctagggttagaaaagctcctgttgtgcttgatgcatcgcctcct
cctccgaggaagcgacagaagattgataggaggagtgaggtgagcagttgtagcagggtg
gagaaaggagatgtggtgaagctggagtcgccttgttcgacttccaaggatttggaagaa
ggcactagtgcttggggattgagattgagagctaggagtaagagaaggactaacagagta
aggaatagtgtgaatttgtctccggtgggtaaaaggaagctttttcaggatgttgacggg
ctgaaggaagaaacagagttagaggttggagaggtggataaagaagaagatagtgaatgt
gaaaaatcaactatagttaagtcgaagagacctggaagaataaaagcttcaaatgtaatg
gttaccgagcagcaagaaactgatgcaggtggtggtgtggaagctggtaaaatgataaac
caggaggagctgctacaagtgagggatggaacagatgacggcatttcaatgactggattt
aaggagggagttgaggatggcaatgcggcatttccgttagttaacaaagacaaggctcgg
ttagagacgtgtgtagtgccagaagaatgccacgcgactaaccaggtgagtatgctggaa
caggatttgcaaagtaaaaatgaattgagtattggggtgaatgaccaaaaggatgctgtg
gaagttggtttacttgctaatggtgaaaaagatggaggcacagagaaacaagctgaagat
ggagttgacagagttgattatgcacaggaaaaagatgaaggtgtttttagtgataaagct
ctggaaatggtgaagctggtcaagaaagaatgtgcttctgataacactctgagaaagtgg
cgtataagagagggaagacgttgtggtttgtgtggaggaggtactgatggtaaacctcca
aaaaagctagtttatggggctgccagtgatgatgaagcacacagtgggtcctctgcttct
gatgaacctaactatgacatgtgggatggatttggtgatgaacctggctggcttgggcgt
ctcttggggcccataaatgatcgttatggtatagctgggatttgggttcatcagcaatgt
gctgtatggagtccagaggtttattttgctggcttgggatgcttgaaaaacgttagggca
gcgctctgcaggggaagggtcttaaaatgcagccgttgcggaaggcctggggcaacaatt
ggttgccgtgttgatagatgtcccaaaacttatcacctgccttgtgcacgggccaatggc
tgcatttttgaccatcgcaaatttctcattgcctgtacagatcaccgacatctcttccaa
ccatatggaagtaattatttgcaacgtataaagaaattgaaagctagaaaaatgaagttt
gagctgagaaagttgtcaaatgatgcattgcgcaaggatgttgatgcagaggaaaaatgg
ttagagaactgtggagaggatgaggagtttttgaaacgtgaaagcaagagacttcatcga
gatctattgagaattgcacctgtttatattggaggctcaaactctgatgctggcatacaa
tttcagggttgggactccgttgctgggcttcaagatgtcatccaatgtatgaaggaggtt
gtcatcttaccacttttgtatcctgagctctttagttctctggggcttacacctcctaga
ggagttcttttgcacggatatcctgggacaggtaaaactttgatagtacgggcactaatt
ggttcatgtgcacgtggtgataaacgaatagcttattttgcccgtaaaggggcagattgt
ttgggaaagtatgtcggggacgctgagcgtcagctaagacttctttttcaggtagccgag
aagtctcaaccttctgtcattttcttcgatgaaatagatggtttggcaccttgccgtggt
aggcagcaagaccagacacatagttcagtcgtgtccactttgcttgctctaatggatggt
ttaaaatctagaggttcagttgttgtaataggtgccacaaatcgtccggatgctgttgat
cccgcattaaggcgtccgggtaggtttgatcgtgagatttattttccacttccatctgtt
aaggacagagaatctattctctcattgcatacaaagaaatggcctaagccagtgtctgga
ccagtactcaagtggatagctataaagacagtgggctttgctggtgctgatttgcaggct
ctgtgtactcaggcagccataattgctttaaaaaggagttttcccttgcataagcgtctc
tctgcagttgtgaaggtgcccaatgctgcatgcccccctcttcccaattttaaggtggag
gagagggattgggtagaggctcttacgtgtgcaccacctccatgttcacgtagagaagct
ggaatggctgcaaacgatgtggtttcagcgcctctacacatatttcttgttccatgtctg
ctgcaaccacttagtagattgcttgtatccctttatctggacgaacgcctctggttgccg
cccctactcttcaaagctgctgaatttgtaaaagacgttgttctttctgcaatgattgag
aagaaattaccaagcaataattggcagtcctatgttaataatttgcttcatgaaccagat
gttatcagtcagattgagaatcactttatacgtgccaacattctggttggagatgctaat
attggtagttttgatgctgttgatgatgacattgttcatggtctctctaattctcaacca
tcaaaattgcagtgggcaggggctcggcctaaattgttgaagaatatctttcatatgccc
ggaaagaaatcgggatttagaatactaatttctggaaatccaagatctggccagaggcat
cttgcttcctctcttcttcattgttttgttggtaatgttgacgtccagaaggtggatttg
gctactatttctcaagaaggacatggagatgtcattcaggggttgacgcagatactgatg
agatgtgctagtgtggagaagtgcatgatatttatgccaagagttgatttatgggccatg
gatacatctgatccagtctgtcaagaggatggttgctctttagtaaaccctgaatcatta
ggcaaggatgaggaaaggagctttaaccatagtggagaccaggctggagatgctctcaaa
agagcctcctatctgtggagctcctttgttgagcaagtggaaagtatatgcatggccaca
tctgtgatgcttctggctacatctgatgtaccattggaagcactccctgttagagtgagg
cagttctttaaaagtcaggcgttgaacagcagtatcccatttcccttggaggattcagtt
tctagatttactgagcagcttgatagaaattttgatcaagaatgtctgattgattcctct
gccgcaaagttgtcaaaagatttagctcaacacttcattcagctgattcatcgtacaaac
catgtccacttgcacacatgcaatgatgaagctagtgataaacctgagggcgatgttgcc
atagaatgtcagaggttagatcttagatcaactattgagcatgtgaataaacaatgtcca
cttcctacttctgcaatagttaacagtagaaatgtaaaagggaaatcaaacttgatgtta
gcaattaccacatttggctatcaaattctgcgatatcctcattttgctgaactttgctgg
tttacttccaagttaagagaaggtccttgtgctgacatagatggaccttggaagggttgg
ccattcaattcttgtgttattcgtcctattaactcaacggtaaatgttgcccttccatcc
aacaatagtaaaggcaaagagaaatactgtatggtgcgaggcctgatagctattggattg
ttggcatacagaggcaaatactcatccgtcagagaagtttctgcagaggttcgaaaagtt
ctcgagcttctggttcagcagatcaatgataaaattcggaatgggaaggataggtatcaa
tttgttcgtcttttatcccaagttgcttatctcgatgacatggttaatagctgggtttat
tcgttgcagagtttagggggagacactcaactttcagaggcaaacccaaagattggttgt
gtgggacttccagaaagtgctaatgttcctgagaatacacttctgagggagggaggttgc
gagttagaagaatcccttgacaaagcggagacattggaaacatgtcagccagaactaact
gctgaaaattgtatgcgtgttaatccagaagcaaatggtttttctaattttccagatatt
ggaactgaggaacacgagtctcctcacttggtggctgtaaaccattctgccccttctagg
caagtgacccgttctgtgcatagtgttcttaatcataattcatgcatgcgggatgatact
gacaaacatttagaaagtattggagattgtgtatctaagcggcaatctaatgggcgcatg
gagttaaatattgatgatgttcaagaggatggtagtagttattccaacgacaggtgtggc
atcgagcattctaattatactttgagttccagctcaaatggcatattgtccactctgaac
aaccttcaaattagagatagcaacaaaaagtctgttggcagtagcgtaggtcttgaatgt
tcaaatatatcttcaaatgttgctactgattctagcctagtatgtttatatcggtgctgt
cctcagtgcctgctgaaccttcagcgcaccttgaaaaaaatgctttcctacgaatgggaa
cttaaaaaggccgagtttatagtagaggatgcttatgactttctggcctcattagctgca
aatcttcattcggctttgagggtatggttgctggctgatgattcaacttcgtttgatgag
aagcgagtacgagtacaagaaaggtacagtgaatcctttgaatgcaaggaaactaacttg
tgtgaatgtagaaacttagagaacaggttaatcaagctgatagagtgcaactgccatttg
aaaagcagtgtcaaaactgagaaatgcaaatcttctcagaacttgcatcaggagtttata
tttagagatggtgtactgaccaatttagaagataaggatgtttctactcattgtaaattt
gagactttatgcctttgttctcttgtagagtggatagtaatgagaaaaaacccactttat
tga
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