Solanum dulcamara (climbing nightshade): 129893336
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Entry
129893336 CDS
T09577
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00541
Biosynthesis of various nucleotide sugars
sdul01100
Metabolic pathways
sdul01250
Biosynthesis of nucleotide sugars
Module
sdul_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
129893336
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
129893336
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DUF7381
NmrA
Motif
Other DBs
NCBI-GeneID:
129893336
NCBI-ProteinID:
XP_055824821
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Position
6:complement(3440025..3443439)
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AA seq
674 aa
AA seq
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MSTYTPKNILITGAAGFIASHVANRLVRSYPEYKIVVLDKLDYCSNLKNLSPSRSSPNFK
FVKGDIGSADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH
RGDVGHVYNIGTKKERRVIDVAKDISNLFNKDPDASIQYVENRPFNDQRYFLDDQKLKNL
GWAERTTWAEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGVERNLDGAEKDDTGS
SECLANANHTGMVVPASKISNSPSKSPYKFLIYGRTGWIGGLLGKLCEKQGIPYEYGRGR
LEDRSQLLTDIHTVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLNLADVCKENG
LLMMNFATGCIFEYNAAHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYPNVCTLR
VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPG
VVSHNEILEMYKKYINPEFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKES
LIKNVFEPNRKTDA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctacaccccaaagaatatacttattactggagctgcggggtttattgcatct
catgttgccaaccgccttgttcggagttaccctgagtacaagattgttgtccttgataag
cttgattattgctcaaacctgaaaaatctttccccttctcgatcttcccctaattttaag
tttgttaagggagacattggcagtgctgatcttgttaactaccttctcatcaccgagaac
attgacactataatgcactttgcagctcagacccatgttgacaactcctttggtaatagc
tttgagttcaccaagaacaacatttatggcacacacgtgctactagaggcatgcaaagtt
actggtcagatcagaaggtttatccatgtcagcactgatgaggtttacggagagactgat
gaagatgccgttgtaggaaaccatgaagcctcacaactccttcccacaaacccatattca
gccacgaaagctggggctgaaatgcttgttatggcatatggaagatcatatggattgcct
gttatcaccactagagggaacaatgtgtatggtcccaatcaatttcctgagaagctaatc
ccaaagttcatacttttagctatgaatgggaagcctcttcctattcacggagatggttca
aatgttagaagttatctctattgtgaggatgttgctgaggcttttgaagtcattcttcac
cgaggagatgttggtcatgtttataacatagggactaagaaagagaggcgagtgattgat
gttgccaaagatatatccaatctttttaacaaggatccagatgcaagcattcagtacgtg
gagaataggcccttcaatgaccagaggtattttctagatgatcagaagttgaagaacttg
ggttgggctgagaggaccacgtgggcagagggtctcaaaaaaaccatggattggtatatc
aataatcctgattggtggggagatgtctccggggcattgcttccccatcctagaatgctg
atgatgcctggtggggtagagagaaatttggatggagcagaaaaggatgatactggatca
tctgagtgcttagcaaacgccaatcataccggaatggtagttccagcttccaagatcagc
aactccccaagtaaatcaccttacaagtttttgatttatggtaggactgggtggattggt
ggtctgctaggcaaactatgtgagaaacagggaattccttacgagtatggaaggggacgt
ctggaggatcgctcacaacttttgacagacattcatactgtgaagcccacacatgtattc
aacgctgctggtgtcactggtaggcccaatgttgattggtgtgagagtcataagactgaa
acaattcgcacaaatgttgctggaactctcaacttggcagatgtttgtaaagagaatggt
ttactgatgatgaattttgcaaccggttgcatatttgaatacaatgctgcacacccagaa
ggttctggcattggattcaaagaggaggatacacccaatttcaccggttctttctattca
aagaccaaggccatggttgaagagttgttgaaagagtaccccaatgtctgcaccctcaga
gtccggatgccaatatcttcagacctcaacaacccccgtaacttcattaccaagattagc
cgctacaataaagtggttaacattcccaacagcatgacaattttggatgagcttcttcca
atttcaatcgagatggcaaagcgtaatctcacaggcatatggaatttcacaaaccctggt
gttgtgagccataacgagatcttggagatgtacaagaaatacataaacccagaatttaaa
tggtccaacttcacattggaagagcaggctaaggtaattgttgcacctcgcagcaacaat
gaaatggacgcatccaagttgaaaaaggagttccctgagttgctgtctattaaagaatca
ctgatcaaaaatgtgtttgaaccaaatagaaaaactgatgcataa
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