Solanum dulcamara (climbing nightshade): 129893490
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Entry
129893490 CDS
T09577
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129893490
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129893490
Translation factors [BR:
sdul03012
]
Eukaryotic type
Elongation factors
129893490
Prokaryotic type
129893490
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
129893490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
CCDC106
PilZ
Motif
Other DBs
NCBI-GeneID:
129893490
NCBI-ProteinID:
XP_055825004
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All DBs
Position
6:complement(38021635..38028935)
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AA seq
1055 aa
AA seq
DB search
MAPMVTIATSNVSVTPGAVLLMRRNSCLSRYDVSRKSSKQTLPSPKYILPLSTSVKLFPH
FRVGCILRPKLRGLIVSATETDVAVEEVEATATDDGSGKASEASSDATETSEESSMSDVS
PTSVRSKRSRPARKSEMPPVKNEDLIPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSRL
SDSFVKEVGSIVSVGQEVTVRLVEASTETGRISLTMRESDDPNRPQQQKDAPTSSDRPRI
PRKNTQRNNQRRDEMKKVSKFVKGQDLEGTVKNLTRSGAFISLPEGEEGFLPASEETDEV
FGIIDSGSSLQVGQEVSVRVLRIARGQVTLTMKKEDAASELDSKLSQGVIHTATNPFLLA
FRSNKEISSFLDEKEKEDELAEQSKEGVLEADVVANKIDVLPETTGKEEESVNAANDGVP
ETIYGEDTKQNIDEEVESAPQGSTSTIGQQAEVSPLGDAGETEAETGSYEQAADQISASE
TVAGEEVVEKLTDDDVAENKVATEIPSVTEVAKEREETSADENGGISSPTGQSEAPLENS
KDEDSQEGAGVLETQVESTPSIGEQLSDTAAQQEEVAPNTDQDINVANSSEQNGTASSNE
AAAKAISPVLVKQLREETGAGMMDCKKALTETAGDIVKALEYLRKKGLASADKKSSRATA
EGRIGSYIHDSRIGVLVEVNCETDFVSRGDIFKELIDDLAMQVAAYPQVQYLVPEDVPEE
IIKKEREIEMQKEDLLSKPEQIRSKIVDGRVNKRLEDLALLEQPYIKNDKMTVKDLVKQT
IATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAAQTAVKPVSSPGKEQPAVEAKETTV
EPPKAAVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSTADKKSSRLA
AEGRIGSYIHDSRIGVLIEVNCETDFVGRGETFKELVDDLAMQVAACPQVQYVSIDEIPE
STVNKEKELEMQREDLKNKPENIREKIVEGRVTKRLGELVLLEQPFIKDDSVLVKDLVKQ
TVAALGENIKVRRFVRFTLGEEAKKEGIIEEPAAV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggctccaatggttacaattgcaactagcaatgtatcagttactccaggagccgtgctt
ctcatgagaaggaattcatgcttatcaagatatgatgtttcgcgaaaatccagcaagcaa
actttacctagcccaaaatatatcctgcctctgtcaacatctgttaaattgtttccccat
tttagagttggttgcattttacgacctaaattaagaggtctcatagtatcagcaactgag
actgatgtagcagtggaagaagtagaagcaactgctacagatgatggatcaggtaaagcc
tcagaagcttcatctgatgctactgaaacaagtgaagaatcctccatgtcagatgtgagt
cctacatctgttcgatccaagcgttcaagacctgctagaaagagtgagatgcctcctgtg
aagaatgaagaccttattccaggtgcaacttttactggaaaggtcagatcgatccagcca
tttggtgcttttgttgatttcggagcttttacggatggacttgtgcatgtttctaggttg
agtgatagttttgtaaaggaagtaggaagcattgtatctgttggacaagaggtgacagtg
agattggttgaagcaagcactgagacagggcgcatatctctcaccatgcgtgaaagtgat
gatcctaataggccacagcaacagaaagatgctccaaccagtagcgacagaccccgaatt
ccaaggaagaacacacaaaggaacaaccaaaggagagatgagatgaagaaagtctcaaag
tttgtcaaggggcaagatcttgagggcactgtaaaaaatctaaccaggtctggtgctttt
atatctcttcctgaaggagaggaaggattcctgccagcatcagaagaaaccgatgaagta
tttggaattattgatagtggctcttcactacaagtaggtcaagaagttagtgtccgtgta
ttgcgcattgccagaggacaggtaactttgaccatgaaaaaagaagacgctgcttcagag
ttggactcaaagcttagccagggtgttatccatacggcgacaaatccttttttattggct
ttccgtagcaacaaagaaatctcttcatttttggatgagaaggaaaaagaagacgaacta
gctgaacaatcaaaggaaggtgtgctagaagcagatgtggtggctaataaaatagatgtg
ttgcctgaaactacaggcaaagaggaagaatcagtcaatgcggcaaatgatggtgttccg
gaaactatatatggggaggatacaaaacaaaacattgatgaagaagtggagtcagctcct
caaggaagcacatccacgattggtcagcaagctgaggtgtcacctttaggagatgctggg
gaaactgaagctgaaactggatcatatgagcaggcagctgatcagatctcagcatctgaa
actgtggcgggcgaggaggtcgtggagaaactaactgatgatgatgtagcggaaaataag
gttgcaactgaaataccaagtgtcacagaggttgccaaagaaagagaggaaactagtgcc
gatgagaatggtggtatatcaagcccaactggccaatctgaagctcctttggagaatagc
aaggatgaagatagtcaggaaggtgctggagttttagagactcaagttgaaagtactcct
tccataggggaacagttatctgatactgctgctcaacaggaagaggtggctcccaatact
gatcaagatataaatgtcgcgaactcaagtgagcaaaatggaactgcttcatcaaatgaa
gccgctgctaaagctatttcacctgttcttgtgaaacaattgcgtgaagagacgggagca
ggaatgatggactgcaagaaggctcttaccgaaactgcaggtgacattgttaaggcgctg
gagtatctcaggaaaaagggattggcaagtgctgataagaaatcaagtagagctacagct
gaaggtagaattggctcatacatccatgatagcagaattggtgtcctggtagaggttaac
tgtgaaacagatttcgtatcacgtggtgacattttcaaggaattaattgatgacttagcc
atgcaagtggctgcataccctcaagtgcagtatcttgttccagaagatgttccagaggag
atcatcaagaaggaaagagaaatcgaaatgcagaaggaagacctattatcaaaacctgag
cagatcagatccaagatcgttgatggacgggtaaataagaggcttgaagatctggcatta
ctggagcagccttacatcaagaatgataagatgactgtaaaggacttggtcaagcagaca
attgcaacaattggtgaaaacatcaaagtgaagagatttgtgagatacaacctgggagaa
ggtcttgaaaagaagagccaagactttgctgcagaggtggctgctgctcaaacagcagtt
aaacctgtctcctcgccaggaaaagagcaacctgctgttgaagccaaggagactactgtt
gagcctccgaaagcagcagtttcagccgctttggttaaacaactgcgagaagaaactgga
gccgggatgatggattgcaagaaagccctctccgaaactggaggggatcttgagaaggca
caggaataccttcgaaagaagggtctttcaactgccgataaaaagtctagccgtcttgct
gctgaggggagaattggttcgtacattcatgactctcgcattggtgtgctaattgaagtt
aattgtgaaactgactttgttgggagaggcgaaacatttaaggagttggtcgatgatttg
gcaatgcaagttgcagcatgcccacaggtgcagtatgtatctattgacgagattccagaa
agcactgtcaacaaggaaaaagagttggaaatgcagagagaagatcttaagaacaagcct
gaaaatataagggagaagattgttgagggcagggtcaccaagagacttggagagcttgtt
cttttggagcagcctttcataaaagatgatagtgttcttgtgaaggatttggtaaagcaa
actgttgctgctcttggggagaacataaaagttaggagatttgttcgatttactctaggt
gaggaagccaaaaaagaaggaataattgaggagccagctgctgtatga
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