Solanum dulcamara (climbing nightshade): 129893509
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Entry
129893509 CDS
T09577
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129893509
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129893509
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
MTIFs
129893509
Prokaryotic type
129893509
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
129893509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
IF2_N
RsgA_GTPase
Roc
Arf
Motif
Other DBs
NCBI-GeneID:
129893509
NCBI-ProteinID:
XP_055825027
LinkDB
All DBs
Position
6:complement(4059217..4068559)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKKFGTVNRIWGGKRWRYVSVCRYSVT
TDIIADQGTSISLDSSSSSNDDDDADLLLKPAPKPQLKPGPKPGPVLGNGPVLSSDSDGE
KRNPIEEERNKVIESLGEALDKVEKLETNRKTNVSVNKSYANPRTSQRNSKPVDSDDSSN
RKSKTLKSVWKKGNPISAVQKVVKPPPKQEPMTDGGRKSESQTVAPLKPPQPPQKVQPQL
LARPSVAPPPPFIKKPVILKDVGAGAKSPPSDGIESTGKTKEPESAGKTKERKTILVDKF
ASKKPAVDPMIAQAVLAPPKFGKNAPPGKFREEFRKKTGASGGQRRRMVDDGIPDEEASE
LDVSIPGRARKGRKWTKASRKAARLKAAQESAPVKVDILEVGEEGMPTEELAYNLATSEG
EILGLLYSKGIKPDGVQTLSNDMVKMVCKEYEVEVIDAASIKVEEMARKKEIFDEEDLDK
LEDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPIDTKPQICVF
LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKVDK
DGANPERVMQELSTIGLMPEDWGGDIPMVKISALKGENIDDLLETVMLVAELQELKANPQ
RNAKGTVIEAGLDKSKGPVATFIVQNGTLKGGDVMVCGEAYGKVRALFDDKGKRVDEAGP
SIPVQVIGLNNVPFAGDEFEVVESLDIAREKAEERAESLWNERLSTKAGDGKITLSSFAS
AVSGGTGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLQATGDVTASDVDLA
VASKAIIFGFNVRTPGSVKSYADNKGVEIRLYKVIYDLIDDVRKAMEGLLESVEEQVPIG
SAEVRAVFSSGSGRVAGCMVTEGKVVEECGIRVTRKGKEVHVGVVESLRRVKEAVKEVNA
GLECGIGVEDFDDFEVGDILEAFNSVQKRRTLEEASASMAAALEEVGRGL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtatggcttccctggtgagtttggggagtgtttgtggatgttcttctggacag
tttgaagggtcattctcactagttaggagggtttctttttctaagaagtttggaaccgta
aatagaatttggggagggaaaagatggcgttatgtttctgtgtgtagatattcggtcacc
acggacattattgctgatcaggggacatcaatttctcttgattcctcatccagtagtaat
gatgatgatgatgctgatctcttacttaagcctgccccaaaaccacaattaaaacctgga
cctaaacctggccctgttttagggaatggaccagtccttagctctgattctgatggtgaa
aaaagaaatcctattgaagaagaaagaaacaaggtcattgagtcacttggagaagcatta
gataaagtggagaagctagaaactaacagaaaaacaaatgtgtcggttaacaagtcgtat
gccaatccacgtacttcacaaagaaatagcaagccagttgattctgatgattcttccaac
aggaagtctaaaactttgaagagtgtttggaaaaaagggaatccgatttctgccgtacaa
aaagttgtaaaaccaccccctaaacaggaaccaatgactgatggtggaaggaagagtgaa
tcccaaactgttgctcctctaaaaccccctcagccaccccagaaggttcaaccacagtta
ttagcaagaccgtctgtagctcctcctcctccttttatcaagaaaccggtgatattgaag
gatgttggtgctggggcgaagtcccctccctctgatggaattgaatctactggaaagacc
aaagaacctgaatcagctggaaagaccaaagaacgcaagacaatattggtcgacaaattt
gcctccaagaaaccagctgttgatcctatgattgctcaagcggttttagcccctcctaaa
tttggaaagaacgcacctcctggtaaattcagggaggagttccgtaaaaagactggtgca
tctggaggacaacgcaggcgtatggttgatgatgggattcctgacgaggaggcatcagag
cttgatgtttctattcctggtagagcaaggaagggaagaaagtggaccaaggcaagtcgc
aaggcagcccgacttaaggctgctcaagagtctgcacctgtcaaagtagatattctagag
gttggtgaagaaggaatgccgaccgaggagttggcctacaacttagctactagcgaaggt
gaaattcttggtcttctatattcaaaaggaatcaagcctgatggtgtgcaaactctcagt
aatgacatggtgaagatggtttgcaaagaatatgaagtagaggttattgatgctgcctcg
attaaagtggaagagatggcaagaaagaaggaaattttcgatgaagaggacttagataaa
cttgaagatagacctcctgtcataactataatgggtcatgttgatcatggaaagactact
ctcttggaccatatacgcaagaccaaggtggcggcttctgaagctggtggaattactcaa
ggaattggggcatataaggtgcaagtgcctattgacaccaagccccagatatgtgttttt
cttgatacacctggacacgaggcttttggggcaatgagagctcgtggagcaagagtaaca
gacattgctatcattgttgtagctgccgatgacggaattcggcctcagacaaatgaggcc
atagcacatgccaaggcagcgggagttccaattgtgattgccataaataaggttgataag
gatggagcaaatcctgagcgagtcatgcaagaactttccaccattggtttgatgccggaa
gattggggtggtgacattccaatggttaagatcagtgctcttaaaggagagaatatagat
gatttgctggaaactgtcatgcttgttgcggagttgcaagagttgaaggctaatcctcaa
agaaatgccaaggggactgtgattgaggcaggtctcgataaatctaaaggacctgtagca
acattcattgtgcagaatggtacactgaaaggaggagatgtaatggtttgtggtgaagct
tatggaaaggtgcgggctctgtttgatgataagggaaaacgtgttgatgaagctggaccc
tccatacctgtgcaggtgattggactgaacaatgttccatttgctggtgacgagtttgag
gttgttgagtcccttgatattgctcgtgaaaaggctgaagaacgagcggagtccttgtgg
aatgaacgtttatcaacaaaggccggagatgggaaaattacactctcttcttttgcttct
gctgtttcaggaggaactggtctagacttgcaccaactaaatattattctgaaagttgat
cttcagggatccattgaggcggtcagacaagctcttcaggttcttccacaggataatgtc
actttgaagttcctactgcaagctactggtgatgtgaccgccagtgatgttgatcttgct
gtagcaagtaaagctattatttttggctttaatgttagaactccgggttctgtcaagagc
tatgcagacaataaaggtgttgaaatccgactatacaaagttatatatgatcttattgat
gatgtgcgaaaagcaatggagggacttctggaatcagttgaggaacaagtgccaattggt
tcagcagaagtacgtgctgtgttcagcagtggtagtggtcgtgtcgctggatgcatggta
acagagggaaaagtagtggaagaatgtggtattcgtgtcactagaaaaggcaaagaagtt
catgttggtgtggtcgaatctttaagacgggtgaaggaagctgtgaaagaggttaatgcg
ggattagagtgtggtattggggttgaggatttcgatgactttgaggtgggtgatattctg
gaggctttcaactcagttcagaaaagacgaacactcgaagaggcctcagcatcaatggca
gcagcacttgaagaagtggggagaggcctttaa
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