Solanum dulcamara (climbing nightshade): 129893731
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Entry
129893731 CDS
T09577
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129893731
Chaperones and folding catalysts [BR:
sdul03110
]
Heat shock proteins
HSP100
129893731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
129893731
NCBI-ProteinID:
XP_055825100
LinkDB
All DBs
Position
1:complement(67210214..67217704)
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AA seq
923 aa
AA seq
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MARALVQSTSIPSSVAGERTTKFNRSGKTKRTVTMLCNAQSSSLRLRDFTGLRGCNAIDT
LVRSGQTLQSKVAAATSVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVG
ASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKAQITALIDKNKEMSKAESESGDTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSD
GNVTVLNGSSGTPSDPAPEPIPV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctagagctctagttcagtcaactagcatcccatcgtcagttgctggtgaaaggacg
accaaattcaatcgatctgggaaaacaaaaagaactgttacaatgctatgcaatgcacaa
tcatcttcgctaaggctgagggattttacaggattgcgaggatgcaatgcaatagataca
ctagttagatctggacaaactctccaatccaaggtagctgctgcaacttctgtcagacga
ccacgaggttgccgatttgtaccaaaagcaatgtttgagcgcttcacagagaaggcgata
aaagtcattatgcttgcacaagaagaggccagacgacttggtcacaattttgttggtact
gagcagattttgttgggtcttattggtgagggaactggtattgctgccaaggttcttaaa
tcgatggggatcaatttgaaagatgctcgtgtggaagtggagaagattattggaaggggt
agtggatttgttgctgtcgagatcccttttacgcctcgtgccaagcgtgttctggaactc
tctctggaggaagcccgccagctagggcataactatattggttcggagcacttgctactt
ggattgctacgtgaaggtgaaggtgtggctgcccgtgtccttgaaaatttgggtgctgac
cccagcaacatccgcactcaggtgatccgaatggttggtgagagtaatgaggctgttggt
gctagtgttggaggtggaacttctggccaaaaaatgcctacactagaggagtacggaaca
aatttgacaaaattagcagaagaggggaaattggaccccgttgttggaagacagccgcaa
attgaacgggtcactcaaatcttgggtcggcggactaagaacaacccttgtcttattgga
gaaccaggtgttggcaaaacagctattgccgagggtttggcacaaagaattgcaaatggt
gatgtccctgaaacaattgaggggaagaaggtgataactcttgatatgggattgcttgtt
gctgggacaaaataccgtggagagtttgaggaaaggctaaaaaagctgatggaggaaatc
aaacagagtgatgaaataatactatttatcgatgaagtgcacacattgattggagctgga
gcagcagagggggccatcgatgctgcaaacatcttgaaacctgccctagctcgaggtgaa
ctacagtgtatcggagctacgacactggatgaatacagaaagcatattgagaaagatcct
gcactggagaggagattccagccagttaaggtccctgaacctactgttgatgaaactata
cagattctgaaaggtcttcgtgagaggtatgagattcatcacaaacttcgttacactgat
gaggccttagtggctgctgctcagctctcataccaatacatcagtgaccgatttctgcct
gataaagcaattgatttgattgatgaagctggttctcgtgttcgacttcgccatgctcag
ctccccgaggaagcaaaagagctcgagaaagagcttcgtcagattacaaaggagaagaat
gaagctgtccgcggtcaagatttcgaaaaggctggggaattacgtgatagagaaatggat
cttaaggcacagatcacagccctcatagacaaaaacaaagagatgagcaaggctgaaagt
gagtctggagatacaggtcctcttgtgacagaagcagatattcagcacattgtatcttct
tggactggtatccctgttgagaaggtctccactgacgaatctgatcgcctcctaaaaatg
gaagaaacactccacactagaatcattggccaggatgaagctgtcaaagccattagtcgc
gctattcgacgtgcgcgagttgggctcaagaatcccaaccggcctattgctagtttcatc
ttttctggtcccactggtgttgggaaatcagaactggcaaaggccctggctgcatattac
tttggttctgaagaagcaatgatccggcttgatatgagtgagttcatggagagacacacg
gtctctaagctcattggatcgccccctggttatgttggttacacagagggtggtcaattg
actgaagctgttaggcgtcgaccttatacggttgtgctctttgatgaaattgagaaggca
catcccgatgtattcaacatgatgcttcaaattcttgaagatggaaggttgacagacagc
aagggtagaactgtagatttcaagaacacacttctcatcatgacatcaaatgttggaagt
agtgtgattgagaaaggtggccgtcgtataggttttgatctcgatttcgatgagaaggat
agcagttacaatcgtatcaagagcttagtgactgaagaattgaagcagtacttcaggcca
gagtttttgaacagattggatgagatgattgtattccgccagctcactaagttagaggtt
aaggagatagctgatatcatgcttaaggaggtatttgagaggttgaaagttaaggaaata
gaacttcaagtgacagagaggtttagagacagggtggttgacgagggatacaaccctagc
tatggagcacggcctctgagaagagctattatgagactgttagaggacagcatggctgag
aaaatgcttgcaggtgagattaaagaaggtgattcagttattgtggacgttgattcagat
ggcaatgtgactgtcctcaatggcagtagtggtactccctcagatccagctcctgagcct
atccctgtgtag
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