KEGG   Solanum dulcamara (climbing nightshade): 129893805
Entry
129893805         CDS       T09577                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129893805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129893805
Enzymes [BR:sdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     129893805
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     129893805
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 129893805
NCBI-ProteinID: XP_055825180
LinkDB
Position
7:complement(11365332..11377484)
AA seq 1217 aa
MTISDFMEEVGCSSGKGKISNGSARMDFDIDDLFEVDDDDWDEEEDEDEDDNHDMVLIKE
LGESFLKNFCKKASTGFFDKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR
GDGDWKHASVKFGKVTLERPKFWAGEKFSSDGGKEYLDLWPRHARLQNMTYSARIMVETH
VQVYTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEF
DHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHI
KGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC
EDFRKGKKALAYVDRLIKNCKFPPQESVEECLKAYLFPNLSGFKQKARFLGYMVKCLLHS
FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY
LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGK
VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVD
DSATSLHGKQKVLLDGEWVGICEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS
DAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA
DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR
VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ
EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKVEDSVNFGKTQSKIGRVDSLD
DDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR
QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEA
SLGKGIALGGGQKYATPFSTLSVDAIMEQLHARGFTRWGNERVYNGRTGEMVHSLIFMGP
TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE
RLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPFCRFCESVEDIVKVNVPYGAKLLC
QELFSMGISLKFDTEIC
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgacgatttctgacttcatggaagaagtggggtgtagtagtggtaaagggaagatatct
aatggatcagcaaggatggattttgatattgatgatctttttgaagtagatgatgatgat
tgggacgaggaagaggatgaagatgaggatgataaccatgatatggttttaatcaaagag
ttgggtgaaagtttcttgaaaaacttctgtaaaaaggcatcaactggtttttttgacaag
tatggtttaatcagtcaccagattaattcatataatgacttcatcaactatggaatccaa
agggtgtttgactcggttggggagatccatgttgagccaggttatgatccatcaaagaga
ggtgatggtgactggaaacatgcttctgtgaagtttgggaaagtaacccttgagcggccg
aagttttgggctggggagaagttttcttcagatggtggaaaagagtacctagacttgtgg
ccacggcatgctcgcctccagaacatgacctattctgccaggattatggttgagactcat
gttcaggtgtatacaaaaaagctagttagaagtgacaagttcaaaactggtgtagaccgg
tttgttgacaaggagtgtgaagtggaagacaaaagggatgtcttgattgggagaatccct
gtgatggttaactcagaattgtgctggatgaatggtgttgacaagcctgactgtgaattt
gatcatgggggatacttcattgtcaaaggggctgaaaagaccttcattgcacaggagcag
ctttgtttaaaaagactctgggtgtcaaacaatcccacttggatggttggatatcgccca
ggtgaaaaaaggaagagagtctacatcaaactgactgagaccttgaagcttgagcacatt
aagggaggagaaaaagccctcagtgtatacatcctcgcagaaatgccaatttgggtcttg
ttttttgctctaggtgtatcctctgatagggaggttgtaaatttaattgatgtggatatt
gaagatactactatcgtcaatatactagtagcttctatccatgaggctgataagaattgt
gaggatttcaggaaggggaaaaaggctcttgcttatgttgatagacttataaagaattgt
aaatttccacctcaagaatctgttgaggagtgcctaaaagcatatctgttccctaatctt
agtggtttcaagcagaaggctcgcttccttggctatatggtaaaatgccttttgcactct
ttcattggtcgcagaaaggttgacaacagagatgattttcgaaacaagagattggagctg
gctggtgagctccttgaacgagagctaagggcgcacattaaacatgccgagaggcgtatg
gtgaaggcaatgcaaagagatctttatggagatcgacaagtgcagccaattgagcattac
ttggatgcatcaataattaccaatggtctctccagggctttttccactggacattggtgt
cacccttacaagagaatggagagggtttccggtgtagttgcaactcttagacgaacaaat
ccattgcaaatgactgctgatatgaggaaaacgcgtcagcaggttacatacaccgggaag
gttggcgatgctagatacccacatccttcacactggggaaagctatgttttctatctacc
ccagatggagaaaattgtggcctggtgaaaaatttggctagtatgggtcttgtcagcaca
attattttgaaaccatttcttgagacattgttccggtgtgggatgcaaaagttagtagac
gatagtgccacctcactccacggaaagcaaaaggtactacttgatggggagtgggttgga
atatgtgaagattctgcactcttcgtttcaaagctaagacgtaagcgccgcaggaatgaa
gtgccacaccaggttgaagttaagagagatgagctgcagggtgaagttcgcatattttct
gatgctggaaggattctgcgccctcttcttgttgtttcaaatctaaagaaaatcaaagct
ttgaaagggggagattatggtttccaatctcttctggacaatgggattattgagctcata
ggacctgaagaagaagaagactgtcgaactgcatggggagttgaatacatcttaaaagca
gataaagagaatccacctgctaagtatactcattgtgagttggacatgtcattcctgtta
ggcttgagctgtggtattatcccatttgcaaaccatgatcatgctaggagggtcctctat
caatctgagaaacactctcagcaggcaattgggttttcaacagtgaatccaaacaataga
gttgatacaaatacccatcaattgtattatcctcagaggccacttttccggacaatgttg
gcagattcccttgggaaaccaaaatgtgctcagtaccagaaaggaatgcttccacgacct
gaatacttcaatgggcaatgtgcaattgtcgcagtaaatgttcaccttggctataaccaa
gaagattcattggttatgaatcgtgcttcactggagcgcggaatgtttcgatctgagcat
gttaggagctacaaggctgaggtcgacaataaggaagctatggctaagaagctaaaggtt
gaggactctgtcaactttgggaaaacccagagtaaaattggacgagtggacagcctagat
gatgatggttttccattcattggggcaaatctccagagtggagatatcataattgggaaa
tatgctgaatcaggggctgatcacagtgtcaagctgaagcatacggaaaggggcatggtt
cagaaggttttgctctctgctaatgatgaagggaagaattttgctgttgtatctctcaga
caagttcgttctccatgtcttggagacaagttctccagcatgcatggacaaaagggtgtc
cttggatttctggaatctcaggaaaactttccttttacagttcaggggattgttccagat
attgtaatcaatccccatgcatttccttcaaggcaaacccctggtcagctgctagaagcc
tctctggggaagggcattgccctaggtggtggtcaaaaatatgccactcccttctccact
ttatcagttgatgccataatggagcagcttcatgcgcgaggattcacgagatggggcaat
gagagagtttacaacggccggactggtgaaatggttcattccctgattttcatgggccca
acattctaccaacgcctcatccatatggctgaagacaaggtgaaattccgtaacactggg
cctgtccatccccttactcgccaacctgtggcagacagaaaacgctttggtggaattaag
tttggtgagatggagcgcgactgtcttatagctcatggtgctgcagcaaatctgcatgaa
cgcctcttcacactgagtgactcctcccagatgcacatctgtggtaagtgcaagaacatg
gcaaatgtaatccagagatctgtgcaaggtggtaaggtaaggggtccattttgccggttc
tgtgaatcagttgaagatatagtgaaagttaatgtgccatacggtgcaaagttgttgtgc
caggagctcttcagcatgggcatatctctcaagttcgacactgagatttgctaa

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