Solanum dulcamara (climbing nightshade): 129893893
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Entry
129893893 CDS
T09577
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129893893
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
eIF-5
129893893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
129893893
NCBI-ProteinID:
XP_055825292
LinkDB
All DBs
Position
7:complement(46663008..46674990)
Genome browser
AA seq
1344 aa
AA seq
DB search
MGRKKATEENPEPPKQGGGGGKSKKKNRVIDDDEYSVKTEEPIVQEETAVPPLGQKKASK
SGAKDDDEKEEDEERKKPAKQGGGGKSRKNVVIDDDEYTIGTEDPVILEEKVAPTIAGGK
KKGKKGKKGASNYGEEDDVQDRLDLTRDDQEDEGIVPFSGKLNKSKRGKASASVFSTTFD
TIGDESSEENEEPVVAGMGKIIGNSFSVALLDEEEEADTSVSKLETETVEEDDAPELIFA
GKKKSSKKKKKSAVSMTEANVREEVEPEQASPMVNPEEADDYESKKKERDVPETSKNKTK
KKKGGRTVQEDEDEIDKILAELGEGAAAAPALSEEKVQVQQESKDNKSKKKKGGRTAQEE
DDIDKILAEIGEGQATPAPASLPQEEKGQLQPQLGDAAAEKEAVEEGAMESAAAKKKKKK
KEKEKEKKAAAAASSVEEKQEETKNDAKGKLADKKQSKQVKEMQERLKRMKEAEEKKKRE
EEERLRKEEEERHLQEELEKLAEEKKRLKKEREKEKLLKKKQEGKLLTGRQKEEARRLEA
MRKQFLANGGTLPLPTGENKKETTKRPIYQTKKSKSQAQANGKTQEESVERSEVKEHQQE
IVSEIDSVETEKVEDVDSTITEEKSEIADAEENEIEEDDDDEEWDAKSWDDADLKLPGKS
AFEDEEVDSKPQPITKKEIKVASSAVHGAATLPVAAKSVIPTQKAAATVPGVLKNDRSRK
EGEPEDRVADQNNQTGSPEEPGAPNQNEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQE
GEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLC
DIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKVCKNAPIVKAMKQQS
KDVQFEFNTRLTQIVTQFKEQGINTELYYKNKEMGKDTFSIVPTSAISGEGIPDMLLLLV
QWTQKTMVERLTYSNEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVT
TIRALLTPHPMKELRVKGTYLHHKKIKAAQGIKITAQGFEHAIAGTSLYVVGPDDDVEDI
KEAAMEDMKSVMSRIDKSGEGVYVQASTLGSLEALLEFLKTPEVSIPVSGIGIGPVHKKD
VMKASVMLEKKKEYATILAFDVKVTQEARELADELGVKVFMADIIYHLFDQFKAYIDTIK
EEKKKEVAEEAVFPCVLKIVPNCVFNKKDPIVLGVDVLEGIVRIGSPICIPQKDFIDIGR
IASIENNHKPVDYAKKGQRVAIKIVGSNPEEQQKMFGRHFEMEDELVSKISRRSIDILKA
NFRKDLTVEDWRLVMKLKTLFKIP
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagaaggcaacagaagagaaccctgaacctcctaagcagggcggtggagga
gggaagtccaagaagaagaatcgggtgattgacgacgatgagtactctgtcaagactgaa
gaacctatagttcaggaggagacagcagtaccacctcttggtcagaaaaaggccagcaag
tcgggggccaaagatgacgacgagaaagaagaagatgaagagagaaagaagccggccaag
cagggtggtggagggaagtcaaggaagaatgtggtaattgatgatgatgaatacactatt
gggacagaggaccctgtcattctggaagaaaaagttgcacccacaatagcaggtggcaag
aaaaaaggtaaaaaagggaagaagggtgcttctaattatggagaggaagacgatgtacaa
gacagattggatttaacgagggacgaccaagaggatgaaggcattgtccccttctctggg
aaactgaacaagtcgaagaggggaaaagccagtgctagtgtgttttctacaacttttgat
acaattggtgatgaatcgtctgaggaaaatgaagaaccagtcgttgctggtatggggaag
attattggcaattcatttagtgtggcgcttcttgatgaagaagaggaggcagatacttct
gtttctaagcttgagacagagacagttgaagaggatgatgcgccagaacttattttcgca
ggtaaaaagaagtcatctaagaagaagaaaaaaagtgctgtcagcatgactgaagccaat
gttagggaagaagttgaaccagaacaagctagcccaatggttaaccctgaagaagctgat
gattatgaaagcaaaaagaaggaaagagatgtaccagaaacttctaagaataaaaccaag
aagaaaaagggtggtcgtacagttcaagaagatgaggatgagattgacaagattctagca
gaacttggtgaaggagctgctgctgctcctgctctttctgaagagaaagtacaggtgcag
caagagtcaaaagataataaatctaagaagaaaaagggtggtagaacagctcaagaagag
gatgacattgacaaaattctggcagaaattggtgaagggcaagctacacctgctcctgct
tctcttccacaggaggagaaaggccaattgcagcctcaactaggtgatgctgctgctgag
aaggaagcagttgaagaaggagctatggagtctgctgctgcaaagaagaagaaaaagaag
aaggagaaggaaaaagagaaaaaggcagctgctgctgcctctagtgtagaggaaaagcag
gaagaaacaaaaaatgacgccaaaggaaaattggcagataagaaacagtcaaagcaggtt
aaggagatgcaagagagactcaaaaggatgaaggaagctgaagaaaagaagaagagggaa
gaagaggaaaggttaaggaaggaagaagaggaacgacatcttcaggaagagctagaaaaa
cttgcagaagagaagaaacgtttgaaaaaggagagagagaaggaaaagctcttgaagaag
aaacaagaggggaaactacttacaggaaggcaaaaggaagaagctcgaagattagaagca
atgagaaaacaatttcttgctaatggtgggacactgccactccccactggggagaataag
aaagagacaaccaaacggccaatttatcaaacgaaaaagtcaaaatcacaagctcaggct
aatggcaaaacccaggaagagtctgttgaaagatcagaagttaaagaacatcaacaggag
attgtgtccgagattgattctgtagaaactgagaaagttgaggatgtggattcgacaatt
acggaggaaaagtcagaaatagctgatgcagaagaaaatgaaattgaagaagatgatgat
gatgaggaatgggatgcaaaaagttgggatgatgctgatctgaaacttcctggtaagagt
gcttttgaagatgaggaggtagattcaaaaccgcagcctataactaagaaagagattaag
gttgcaagttcagctgttcatggcgcagcaactctgcctgttgctgccaagtcggtgatt
cctactcaaaaagctgctgcaactgtgccaggtgtactgaagaatgaccgaagtaggaaa
gagggtgagcctgaggatagggttgcagatcaaaataatcagacaggcagtcctgaagaa
cctggtgctcctaaccagaacgaagacaatctccggtctcctatttgctgtattatgggg
catgttgatactggtaaaaccaagctacttgattgcatacgaggcaccaatgttcaagaa
ggtgaagctggagggattacccagcagataggtgcgacttactttccagctgagaatata
cgcgagagaacgaaggagctcaaagctgatgcgaagctgaaggtccctggtttgctggtc
atcgacactcctggacatgaatctttcacgaatctgcgttctcgaggttcaggtttatgt
gatattgctattttggttgttgacatcatgcatgggctagaaccacagaccatagagtca
cttaatcttcttaagatgaggaatacagaatttattgttgctctgaataaggtggatagg
ctttatggatggaaagtttgcaagaatgctcccattgtgaaggcgatgaagcaacagtcc
aaagatgttcagtttgaatttaatacgaggcttactcagattgtcacccagttcaaggaa
caaggtataaatacagaattgtactataaaaacaaagaaatggggaaggacacttttagt
attgtaccaactagtgctattagtggtgagggtattcctgacatgctgttattacttgtt
caatggacacaaaagacaatggttgagagacttacttacagcaatgaagtccagtgtaca
gttttggaggttaaggttgttgaaggtcatggaacaaccattgacgtggttttggttaat
ggcgtgcttcatgaaggagatcaaatagtcgtttgtggcatgcagggacctattgttacc
acaatccgagcattactaacgcctcaccccatgaaggaactccgagtaaagggaacatat
ttgcatcataagaaaatcaaggctgcccagggtataaagattaccgctcagggctttgag
catgcaattgctggcactagtctatatgttgtggggcctgatgatgacgtggaagacatc
aaagaagcagctatggaagatatgaagtcagtgatgagcaggattgacaaaagtggagag
ggagtatatgttcaagcatctacacttggatcattggaagctttgctggaattcttgaag
accccagaagtaagcatacctgtcagtgggattggcataggtcctgtgcataaaaaggat
gtcatgaaagctagtgttatgcttgagaagaagaaagagtatgcaaccatcttggccttt
gatgttaaagtgacgcaggaagctcgggaacttgcagatgaacttggtgtcaaggttttt
atggctgacattatttatcacttatttgatcagtttaaagcctacattgacactattaag
gaagaaaaaaagaaggaagttgctgaagaagcagtcttcccctgtgtgctcaagatcgta
ccaaattgtgtcttcaacaagaaggatccaattgttctgggagttgatgttcttgagggc
attgtcaggattggatctcctatatgtattcctcaaaaggacttcattgatattggtcgt
attgcatccattgagaacaaccataagcctgttgactatgcgaagaaaggccaaagggtg
gccattaagatagttggatctaaccctgaggagcaacaaaagatgtttggtaggcatttt
gaaatggaagatgagcttgtcagcaaaatttcaaggaggtctattgacatactcaaggcc
aatttccggaaagacctcacagttgaggattggagacttgtcatgaaactgaagaccctc
tttaagataccataa
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