Solanum dulcamara (climbing nightshade): 129894056
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Entry
129894056 CDS
T09577
Name
(RefSeq) ESCRT-related protein CHMP1A
KO
K12197
charged multivesicular body protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03272
Virion - Hepatitis viruses
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129894056
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129894056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129894056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129894056
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
129894056
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129894056
Exosomal proteins of other body fluids (saliva and urine)
129894056
Exosomal proteins of colorectal cancer cells
129894056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
Motif
Other DBs
NCBI-GeneID:
129894056
NCBI-ProteinID:
XP_055825529
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Position
7:complement(1755919..1756928)
Genome browser
AA seq
203 aa
AA seq
DB search
MGNTEKLMNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR
KRSEQMNYLRLSSRLDAVVARLDTQAKMSTISKSMGNIVKSLESSLNTGNLQKMSETMDQ
FERQFVNMEVQAEFMESSMAGSTSLSTPEDQVNSLMHQVADDYGLEVSVGLPQAAGHAIP
TKDSEKVDEDDLTRRLAELKARG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacagagaaattaatgaaccagatcatggagctcaagttcacatcgaagagt
cttcaacgccaagcccgaaaatgtgagaaagacgaaaaatccgagaagcttaaggtgaaa
aaggcgatcgagaaagggaatatggacggcgctagaatttacgcagagaacgcaatccgc
aagcgtagcgagcagatgaattatctccgtttatcttctcgtctcgacgccgttgtggct
cggctcgatactcaggcgaaaatgagcacaatcagcaagtctatgggaaatatcgtcaaa
tcactcgagtcctctcttaataccggtaatctccagaagatgtccgagacgatggaccag
ttcgagcgccagtttgttaatatggaagttcaagctgaatttatggagagttctatggct
ggaagtacctcgctgtcgactccggaggaccaggttaacagtctcatgcaccaggtggcc
gatgactatggccttgaagtctctgtagggcttccacaagcagcgggtcatgcgattcct
actaaggacagtgagaaagtcgacgaggacgatctaaccaggcgccttgccgagctgaag
gcgcgtgggtaa
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