Solanum dulcamara (climbing nightshade): 129894079
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Entry
129894079 CDS
T09577
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129894079
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129894079
SSDB
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GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
129894079
NCBI-ProteinID:
XP_055825564
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All DBs
Position
7:16626500..16635923
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AA seq
445 aa
AA seq
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MASASSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGRVVNTKCNVGANRNQAFI
EFAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPSYL
IPELGPCTLKITYSAHTDLSVKFQSHRSRDYTNSLLPVASSAIDASGQFSLGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGLQALIQYPDVRTAAVAKE
ALEGHSIYQGGYCMLHISYSRHTDLSIKINNDRGRDYTIPNTPMMNPQPSIMGQQPPQIG
GPGVHSYGAPVQYTPAPGVAPPQHSAGWNSAPATATPSMPMQMHSHPYMPAGSMPSQVGS
GMMPMHGQNFLPHSTSMPPYHPQYH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcatctagccaacctcagtttcgatacacacagcccccgtcaaaggtcctt
catttgagaaacttaccatgggagtgcacagaggaggagctgatcgaattgggaaaacct
tttggtagagttgtgaataccaagtgtaatgtaggagcaaaccgaaatcaagcatttata
gagtttgcagaattaaatcaagctattgcaatgatatcgtactatgcctcttcctccgaa
ccagctcaggtacgggggaaaactgtctacctacaatattccaacaggcaagagatagtg
aacaacaaaactacagcagatgtagctggaaatgtgctgttggttacaattgagggaaat
gatgcccgccttgtcagcattgacgttttacacttggtattttcagcttttgggttcgtg
cacaagattacaacatttgagaagactgcaggattccaggctctggtgcaattttctgat
gcagaaaccgctacttcagcaaaggatgccctggatggaagaagcattcccagctacttg
attccggaactaggaccatgtacccttaaaatcacatattctgcccatacagatctgagt
gtgaagtttcagagtcatcgtagcagggactacaccaattctctccttcctgttgcttcc
tcagccatagatgcaagtggtcagttcagtttgggtttggatgggaagaaactggaacct
gagagtaatgttcttcttgcttccattgagaacatgcagtatgcagttaccttggatgtc
ctacacacggttttctcagcttttggtcctgtactaaagattgctatgtttgataagaat
ggagggcttcaggctctgatacaatatccggatgtgcgcacagctgctgttgcgaaggaa
gctttggaaggacattccatatatcaaggtggatattgcatgcttcatatttcttactct
cgacacacagatcttagtattaagattaataatgatcgcggcagagattatacaatccca
aatactccgatgatgaatcctcaaccttcaatcatggggcagcagccgcctcagatagga
ggtccaggtgttcattcatatggtgcccctgtccagtacacgccagctccaggtgttgct
ccgcctcagcattctgcaggctggaactcggcccccgccactgcaactccatcaatgccg
atgcagatgcatagtcacccttacatgccagctggtagtatgccttctcaagtgggttct
gggatgatgccaatgcatggacagaatttcttacctcattctacttcgatgcctccttat
catccacagtatcactag
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