Solanum dulcamara (climbing nightshade): 129894117
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Entry
129894117 CDS
T09577
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 isoform X1
KO
K13717
OTU domain-containing protein 3 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129894117
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129894117
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129894117
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C85
129894117
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
129894117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OTU
Peptidase_C65
SEC-C
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
129894117
NCBI-ProteinID:
XP_055825620
LinkDB
All DBs
Position
7:70202858..70222127
Genome browser
AA seq
378 aa
AA seq
DB search
MAKTKHQKSKPNKQSHSKKHGKQADISEFRAQLDALGLKIIQVTADGNCFFRSLGDQLEG
NEEEHEKYRDMTVKFIRNNRDTFEPFIEDDVPFDEYCESMEKDGTWAGHMELQAASLVTH
TNICIHRHMSPRWYIQNFDNRESRMLHLSYHDGEHYNSIRLKEDSCTGAPNPIIIKADAD
LSAKSREAIAAAKSKGDTGRIMVQVGSVKVVMAGSGCDNSEKVEQVLRQVGGDVDAATEF
LIAEQGSEDQLNANDNFSCLESTSQGSPGEPDIKSGDSPCKKGSSDCSVKGASDKHTSQE
DEKKIPRNKACPCGSKKKYKSCCGSVAGKHPTSYTVSHTIDYGKGRRDKKQGKKVPPVNV
TTSKQSDARPPDMGALCI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacgaagcatcaaaaatccaaaccaaacaaacaatctcattctaaaaagcac
ggaaagcaggctgatatttcagaatttcgagctcaacttgatgcattgggcttaaagatt
attcaagtgacggcagatggaaattgtttcttcaggtcattaggtgatcagttggaaggc
aatgaggaggagcatgagaaatatcgagatatgactgtaaaatttatcaggaataaccgt
gatacgtttgagccttttattgaagatgatgtaccatttgatgaatattgtgagtccatg
gagaaggatggcacttgggctggacatatggaattacaagcagcttctcttgttactcat
accaacatatgcattcaccgacatatgtcacctcgctggtacatacagaattttgacaac
cgtgaatctcggatgcttcatctttcttatcatgacggagagcattacaatagcatccgg
ctgaaggaagattcttgcactggagcacctaacccaattattatcaaggctgatgctgat
ctttcagcaaaatctcgtgaagctatagctgctgccaagtctaagggagacactggtcga
attatggttcaagtaggatcagttaaagtggttatggctggaagtgggtgtgataacagc
gaaaaagtggagcaggttttacgacaagttggtggtgatgttgatgctgcaacagaattt
ctaatcgcagaacaaggatccgaggaccagttaaatgcaaatgataacttttcttgtctg
gaaagcacttcacaagggtctccaggagagcctgatatcaaatctggagactcaccttgt
aaaaaaggttcctctgactgtagtgtaaaaggagcttctgataaacatacctcccaggaa
gatgaaaagaaaattccaagaaataaggcctgtccctgtggttcaaagaagaaatacaag
tcttgctgtggatcagttgctggaaaacatcctactagctatacagtcagccatacaatt
gattatggaaagggtaggagagacaaaaagcaaggaaagaaagttccacctgtcaatgtt
acgacttcaaaacaatctgatgcaaggccaccggacatgggtgcgctttgtatatag
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