KEGG   Solanum dulcamara (climbing nightshade): 129894200
Entry
129894200         CDS       T09577                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdul03036]
    129894200
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129894200
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    129894200
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129894200
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 129894200
NCBI-ProteinID: XP_055825736
LinkDB
Position
7:2015083..2032939
AA seq 1140 aa
MGGTPTIQYVTHIESYVSSSSSAAQQAASIDAIARLVKNDLLSLETLVREMEMYLTTTDS
ITRSRGILLLGELLMQLISKPLGDTAISSLIEFFTERLADWKALHGALVGCLALLRRKTD
TGMINKSQAKAVAESYLKSLQVQSLGQQDKKLCFQILECLLNRYRDALVSLGDDLVYGIC
EAIDGEKDPQCLMLIFHIVELLAQLFPEASGPLANFAGDLFEILECYFPIHFTHPKSDDV
DIKRGELSRALMLAFASTPLFEPSVIPLLLDKLSSSLPSAKVESLKYLSYCTLKYGGDRT
EKYTESLWSALKDALFTCPQSTLLVDSDPIDGLGFHESEIMTQAIELLQVLVRQHNDSFL
SLILGDGDIRTFLNSFSHFNDFNSLSTQYKQRLHAVGHVLSVCIKASGSSCNKVFESFFP
RLVDALRLSVENSHGTVHSALDANFNFGALYLCVELLAACRQLVVSSDKITSAPDLARDS
WFQILHSFCTSLCNVFFCLIRTSCVESTWNAYVYAAVKGLEILATFPGSFILVSKLMYEN
ILLTLTSIIESDFNKKFLWKAALKALVEISLFVNKYPEDEKAASFNSIVRQKIVSLISSV
DLNMPQSLKLEAIFDIGLTGKSFMHSVVSELEKTISASLTEIFVHGDRQLAGLTAGLLEC
YSNKVLPWFHGNGGADEVSLNFAVNIFAKMENSTSLSLEAKGKELLGATMGAMKQAVMGC
SVESQEKVLQKAIDVMETSSFFLSKDLVLVTDLFNKKTQLGQTSEGLSCRDEWITSLFAS
VVIALRPQTQIPNIRFLLQLLVMTLLEGHIPSAQALGSLVNKLPLNISEDCSLEEVIDTL
FKNVMWCNISIGKEGNDGGAVDMSNPRLINLNSHAIVALAWIGKGLLMRGHEKLKDVTMT
LLSCLVSNEDQGNLLPFNDQMKDPPEHKVLCLRKSAADAFHILMSDSDACLNRNYHAIIR
PLYKQRFFNIMMPMFLSAIVKCDSSTSRCFLYQAFAHLVSETPLAAVVGDAKKVLPVLMD
CFLILSTDVSHKEIIYSVLIVLSGILTDKNEQEAIVENAPMVIRRLIELTSYPYVMVIRE
TAIQCLGAMSELPHARIYPMRKQVLQAITKALDDPKRVVRLEAVKCRLAWASIASRSIHF
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgggtggcactccgacaattcagtatgtcactcacattgagtcttacgttagctcttcc
agctcagcagcacagcaggctgcaagcattgatgcaattgctcgtcttgtgaagaatgac
ctgttaagcttagaaaccttggtcagggagatggagatgtatttgaccactacagatagt
atcactcgttcaagaggtatcctcttacttggagaactattgatgcaactaatatcgaag
ccgttgggtgataccgcaataagcagcttgatagaattcttcacagagaggctggcagat
tggaaagcgttgcatggtgcccttgtcggttgtttggctctactaaggaggaaaactgat
actggtatgatcaataagagtcaagcaaaggctgttgcagagtcttatctgaaaagcctg
caggtgcagtccttggggcagcaagacaagaagctttgctttcaaatattggaatgccta
ttaaatcgctatcgggatgcacttgtttcactgggtgatgatctcgtttatggaatctgt
gaagctattgatggtgaaaaggatccacagtgcttgatgctcatatttcatattgttgaa
ctgctggcacaattatttcccgaagcttctggtccattggcgaattttgcaggggatttg
tttgagattttggaatgttactttcctatccattttacccatcctaagagtgatgatgtt
gatataaagaggggggaactctcaagggccctaatgctggcatttgcttcgacaccactt
tttgaaccctcagtcattccattacttcttgacaaactatcttcttctctgccgtcagca
aaggtggaatctttgaagtaccttagctactgcacattgaaatatggcggtgatagaaca
gaaaaatacacagaatccctgtggtctgcattaaaagatgcactatttacttgtccacaa
tccactttgttagtggattccgatccaattgatggattaggttttcatgagagtgaaatt
atgacacaggccattgaacttcttcaggtgcttgttcgacagcataatgattcattcttg
agtttgattctgggtgatggggatatacgcacatttctgaactccttttcccacttcaac
gattttaatagtctttctacccaatacaagcagagattacatgcagttgggcatgttctt
tctgtttgcattaaagcttctggatcttcctgcaataaagtttttgaaagtttctttcct
cggttggtggatgctttaaggctctcggttgaaaattcccacggaactgttcattcagct
ttggatgcaaactttaactttggagccttgtatctatgtgttgaactccttgctgcatgc
agacagctggtagtcagctctgataaaatcacttcagctcctgatctagcacgtgactct
tggttccagatacttcatagtttctgcacatcattatgcaatgttttcttttgtctcatt
cgaacaagttgtgttgaaagcacttggaatgcttatgtttatgccgcagttaaaggtttg
gagatcttggctacatttcctggaagctttattttagtctcaaagctcatgtatgagaat
atcttgctgactttgacgtcaatcattgaatctgatttcaacaagaagtttctatggaag
gccgcactcaaagcactagtggagatcagcttgtttgtcaataagtatcctgaggacgag
aaggcagctagctttaacagtattgtcaggcaaaagattgtttctctgatatcttctgtt
gacttaaatatgccccaatcgctcaaactggaggccatttttgatatcggattgaccggg
aagagtttcatgcatagtgttgtaagcgaattggagaagactatatctgccagcttaact
gagatttttgtccatggagatcggcagttagctggattgacagctgggcttttggaatgt
tattccaataaggtacttccatggttccatggcaatggaggtgcagatgaagtctctttg
aattttgcggttaatattttcgctaaaatggaaaatagcacatctttgagtctagaagca
aagggaaaggaacttctgggtgcaacaatgggtgcaatgaagcaagctgtgatgggctgt
tcagtggaaagccaggaaaaggttcttcagaaagctattgatgtgatggaaacaagctcc
tttttcctttcaaaagatctggttctagtaaccgatctctttaacaagaaaactcaactt
ggtcagacttctgagggtttgtcatgtcgagacgaatggattacttcactcttcgcgtca
gttgtaattgcattgcgtcctcaaactcagataccaaatataagattcttattacagtta
ttggtgatgactctccttgaaggtcatattccctcagctcaggccctgggttctttggtt
aacaaacttcctttgaatatatcagaagactgcagtcttgaagaagttattgatacgcta
ttcaagaatgtaatgtggtgcaacattagtattggcaaagagggcaatgatggtggtgca
gttgatatgagtaacccgagactaattaatctgaatagtcatgctattgttgcattagca
tggatagggaaaggtctgcttatgcggggtcatgagaagctaaaagatgtgactatgact
ttattgagttgcttagtttcaaatgaagatcagggaaatttgcttccttttaatgatcaa
atgaaagatcccccagagcacaaagtgctctgtctcagaaaatcagctgctgatgcattt
catattcttatgagtgattctgatgcttgtttgaacagaaattaccatgcaatcattcgc
ccactttataaacaacgatttttcaacattatgatgcctatgttcttatctgcaatagta
aaatgtgattcatccacttcaaggtgttttctctatcaagcttttgcacacctggtatct
gaaactcctcttgctgctgttgttggtgatgccaaaaaggtccttcctgtacttatggat
tgttttcttatattgagcacggatgtctctcacaaggagataatttacagtgtcttaata
gttctctctggaatattaacggataaaaatgaacaagaagctatcgtagaaaatgccccc
atggttatccgcagacttattgagctcacatcctatccttatgtgatggtgattcgagag
actgcaatccagtgccttggtgccatgtcggagctgccacatgcgaggatatatcccatg
agaaaacaggtgttgcaagctataaccaaagctcttgatgatccaaagagggttgttcgt
ctagaggcagtcaaatgtcggctagcttgggcttcaattgcatcaaggagtattcacttc
taa

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